RNA–Protein interactions for RNA: ENST00000409946.5

LRPPRC-203, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best) BASIC

Gene LRPPRC, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-203ENST00000409946 GATA6Q92908 595 aa16.88■□□□□ 0.29
LRPPRC-203ENST00000409946 TMEM125Q96AQ2 219 aa16.88■□□□□ 0.29
LRPPRC-203ENST00000409946 PPM1MQ96MI6 270 aa16.88■□□□□ 0.29
LRPPRC-203ENST00000409946 SPHK1Q9NYA1 384 aa16.88■□□□□ 0.29
LRPPRC-203ENST00000409946 C6orf203Q9P0P8 240 aaPredicted RBP16.88■□□□□ 0.29
LRPPRC-203ENST00000409946 ABCD2Q9UBJ2 740 aa16.88■□□□□ 0.29
LRPPRC-203ENST00000409946 NEUROG3Q9Y4Z2 214 aa16.88■□□□□ 0.29
LRPPRC-203ENST00000409946 PCDHA9Q9Y5H5 950 aa16.88■□□□□ 0.29
LRPPRC-203ENST00000409946 HEBP2Q9Y5Z4 205 aa16.88■□□□□ 0.29
LRPPRC-203ENST00000409946 IGKV1-8A0A0C4DH67 115 aa16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 DYTNA2CJ06 578 aa16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 MAGEA13PA6NCF6 341 aa16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 FOXE1O00358 373 aaPredicted RBP16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 DNAJA2O60884 412 aa16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 NDUFS2O75306 463 aa16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 TNFP01375 233 aa16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 GBAP04062 536 aa16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 DCNP07585 359 aaKnown RBP16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 SLC19A1P41440 591 aa16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 REEP5Q00765 189 aa16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 PGS1Q32NB8 556 aa16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 SAMD4BQ5PRF9 694 aaKnown RBP16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 PRMT9Q6P2P2 845 aa16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 DNAJC14Q6Y2X3 702 aaPredicted RBP16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 ARMCX6Q7L4S7 300 aa16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 KRT78Q8N1N4 520 aa16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 DPP10Q8N608 796 aa16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 ANKRD53Q8N9V6 530 aa16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 GLB1L3Q8NCI6 653 aaPredicted RBP16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 NELL2Q99435 816 aa16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 RAB11FIP5Q9BXF6 653 aa16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 KLHL4Q9C0H6 718 aa16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 PCBD2Q9H0N5 130 aa16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 CHRDQ9H2X0 955 aa16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 TRNAU1APQ9NX07 287 aaKnown RBP16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 SUCOQ9UBS9 1254 aaKnown RBP16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 DGKBQ9Y6T7 804 aa16.87■□□□□ 0.29
LRPPRC-203ENST00000409946 SPTY2D1-AS1A0A0U1RR47 76 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 ACPPP15309 386 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 MAOBP27338 520 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 CCR8P51685 355 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 FOXM1Q08050 763 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 DNAH14Q0VDD8 3507 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 SELPLGQ14242 412 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 C6orf10Q5SRN2 563 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 ANKRD26P1Q6NSI1 321 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 WASH2PQ6VEQ5 465 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 ADCK2Q7Z695 626 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 PDSS2Q86YH6 399 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 RIMKLAQ8IXN7 391 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 ABHD11Q8NFV4 315 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 OR4E2Q8NGC2 313 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 WDR48Q8TAF3 677 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 GTF2H4Q92759 462 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 CXorf40BQ96DE9 158 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 ASB9Q96DX5 294 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 OR52E6Q96RD3 313 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 AIF1LQ9BQI0 150 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 KIR3DX1Q9H7L2 352 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 SLC6A20Q9NP91 592 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 GPR27Q9NS67 375 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 PCOLCE2Q9UKZ9 415 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 COLEC10Q9Y6Z7 277 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 C19orf67A6NJJ6 358 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 TOR1BO14657 336 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 PRICKLE3O43900 615 aaPredicted RBP16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 DFNA5O60443 496 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 BCAS2O75934 225 aaPredicted RBP16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 MYO1DO94832 1006 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 TBX6O95947 436 aaPredicted RBP16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 IL6P05231 212 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 F3P13726 295 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 TIA1P31483 386 aaKnown RBP eCLIP16.86■□□□□ 0.299e-7■■■■□ 22.9
LRPPRC-203ENST00000409946 CSNK1G2P78368 415 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 ILF3Q12906 894 aaKnown RBP eCLIP16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 TRIM25Q14258 630 aaKnown RBP16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 MAPKAPK3Q16644 382 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 HKDC1Q2TB90 917 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 GTDC1Q4AE62 458 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 SPIN4Q56A73 249 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 NANOGP8Q6NSW7 305 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 COMMD6Q7Z4G1 85 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 ANKRD46Q86W74 232 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 SPEM1Q8N4L4 309 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 OR7A2PQ8NGA2 310 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 UBE2E3Q969T4 207 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 KLHDC7BQ96G42 594 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 SORBS1Q9BX66 1292 aaKnown RBP16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 NANOGQ9H9S0 305 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 SCOCQ9UIL1 159 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 USP22Q9UPT9 525 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 PCDHB11Q9Y5F2 797 aa16.86■□□□□ 0.29
LRPPRC-203ENST00000409946 PCDH7O60245 1069 aa16.85■□□□□ 0.29
LRPPRC-203ENST00000409946 WNT1P04628 370 aa16.85■□□□□ 0.29
LRPPRC-203ENST00000409946 ANXA4P09525 319 aaPredicted RBP16.85■□□□□ 0.29
LRPPRC-203ENST00000409946 S100A3P33764 101 aa16.85■□□□□ 0.29
LRPPRC-203ENST00000409946 SOX11P35716 441 aa16.85■□□□□ 0.29
LRPPRC-203ENST00000409946 MTPNP58546 118 aa16.85■□□□□ 0.29
LRPPRC-203ENST00000409946 MRPS22P82650 360 aaKnown RBP16.85■□□□□ 0.29
LRPPRC-203ENST00000409946 PRDX1Q06830 199 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms