RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 DDAH2O95865 285 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 APODP05090 189 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 SERPING1P05155 500 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 CFIP05156 583 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 MYZAPP0CAP1 466 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 KRT3P12035 628 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 SRCP12931 536 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 TCF4P15884 667 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 PDGFRAP16234 1089 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 GM2AP17900 193 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 TACR2P21452 398 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 GPD1P21695 349 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 RPL10P27635 214 aaKnown RBP4.43□□□□□ -1.7
SF3B1-202ENST00000409915 CRABP2P29373 138 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 SDC4P31431 198 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 CCR1P32246 355 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 PHBP35232 272 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 NUDT1P36639 197 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 MMP13P45452 471 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 ARCN1P48444 511 aaKnown RBP4.43□□□□□ -1.7
SF3B1-202ENST00000409915 MAPKAPK2P49137 400 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 DIO1P49895 249 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 NME5P56597 212 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 STX1BP61266 288 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 TRA2BP62995 288 aaKnown RBP4.43□□□□□ -1.7
SF3B1-202ENST00000409915 YBX1P67809 324 aaKnown RBP4.43□□□□□ -1.7
SF3B1-202ENST00000409915 ARHGAP8P85298 464 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 DMWDQ09019 674 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 TCF15Q12870 199 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 EIF4EBP2Q13542 120 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-202ENST00000409915 CSHL1Q14406 222 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 IL11RAQ14626 422 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 SSPNQ14714 243 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 MOGQ16653 247 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 KLHL38Q2WGJ6 581 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 SLC25A52Q3SY17 297 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 FUT11Q495W5 492 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 PLA1AQ53H76 456 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 MS4A13Q5J8X5 152 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 ADGRF1Q5T601 910 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 UBAP2Q5T6F2 1119 aaKnown RBP4.43□□□□□ -1.7
SF3B1-202ENST00000409915 MANEALQ5VSG8 457 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 LRRC8BQ6P9F7 803 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 DCUN1D2Q6PH85 259 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 C4orf22Q6V702 233 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 IDO2Q6ZQW0 420 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 RBPMS2Q6ZRY4 209 aaKnown RBP4.43□□□□□ -1.7
SF3B1-202ENST00000409915 C22orf34Q6ZV56 151 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 RFPL4BQ6ZWI9 263 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 ADCK2Q7Z695 626 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 CROCCP2Q86T23 111 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 ADAMTSL2Q86TH1 951 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 TRABD2AQ86V40 505 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 CACUL1Q86Y37 369 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 ZDHHC17Q8IUH5 632 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 ERI1Q8IV48 349 aaKnown RBP4.43□□□□□ -1.7
SF3B1-202ENST00000409915 C1orf210Q8IVY1 113 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 CPXM2Q8N436 756 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 MINDY1Q8N5J2 469 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 CCDC185Q8N715 623 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 TERB1Q8NA31 727 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 HJURPQ8NCD3 748 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-202ENST00000409915 PPFIBP2Q8ND30 876 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 EXD1Q8NHP7 514 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 ST7LQ8TDW4 575 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 FAM172AQ8WUF8 416 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 RASSF5Q8WWW0 418 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 SORCS1Q8WY21 1168 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 IGSF8Q969P0 613 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 NT5C3BQ969T7 300 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 RAB7BQ96AH8 199 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 CLDN23Q96B33 292 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 NRBF2Q96F24 287 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 MSANTD3Q96H12 275 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 PGAM5Q96HS1 289 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 RBM14Q96PK6 669 aaKnown RBP4.43□□□□□ -1.7
SF3B1-202ENST00000409915 GAL3ST4Q96RP7 486 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 NUDCD1Q96RS6 583 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 ACOX2Q99424 681 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 PAFAH2Q99487 392 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 CHP1Q99653 195 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 PRMT1Q99873 361 aaKnown RBP4.43□□□□□ -1.7
SF3B1-202ENST00000409915 SRSF8Q9BRL6 282 aaKnown RBP4.43□□□□□ -1.7
SF3B1-202ENST00000409915 SLC25A23Q9BV35 468 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 TMEM109Q9BVC6 243 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 TRIM62Q9BVG3 475 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 HEMGNQ9BXL5 484 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 TDRD1Q9BXT4 1180 aaKnown RBP4.43□□□□□ -1.7
SF3B1-202ENST00000409915 TKTL2Q9H0I9 626 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 SIK2Q9H0K1 926 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 THAP2Q9H0W7 228 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 C11orf54Q9H0W9 315 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-202ENST00000409915 FAM83DQ9H4H8 585 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 ZNF552Q9H707 407 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-202ENST00000409915 MOV10Q9HCE1 1003 aaKnown RBP4.43□□□□□ -1.7
SF3B1-202ENST00000409915 SERINC1Q9NRX5 453 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 TXLNGQ9NUQ3 528 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 GPATCH2LQ9NWQ4 482 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 STX18Q9P2W9 335 aaKnown RBP4.43□□□□□ -1.7
SF3B1-202ENST00000409915 DEC1Q9P2X7 70 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms