RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 ATP6AP1Q15904 470 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 INTS11Q5TA45 600 aaKnown RBP19.92■□□□□ 0.78
USP39-203ENST00000409470 TMIGD1Q6UXZ0 262 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 ZNF621Q6ZSS3 439 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 FAM124AQ86V42 546 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 CBR4Q8N4T8 237 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 SMRP1Q8NCR6 262 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 SIPA1Q96FS4 1042 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 C12orf66Q96MD2 445 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 PDP2Q9P2J9 529 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 KCNK6Q9Y257 313 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 WDR37Q9Y2I8 494 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 RNF103-CHMP3A0A140T963 221 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 ARHGAP10A1A4S6 786 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 PDLIM1O00151 329 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 CEACAM5P06731 702 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 PIK3CBP42338 1070 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 CHRNB3Q05901 458 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 RBBP5Q15291 538 aaKnown RBP19.92■□□□□ 0.78
USP39-203ENST00000409470 CAPRIN2Q6IMN6 1127 aaKnown RBP19.92■□□□□ 0.78
USP39-203ENST00000409470 COMMD6Q7Z4G1 85 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 CALHM3Q86XJ0 350 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 PACRGLQ8N7B6 248 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 FBXO30Q8TB52 745 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 TIMM29Q9BSF4 260 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 APOOQ9BUR5 198 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 UGT2B28Q9BY64 529 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 RMI1Q9H9A7 625 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 PREBQ9HCU5 417 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 UBAP1Q9NZ09 502 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 OAZ3Q9UMX2 235 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 NCKAP1Q9Y2A7 1128 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 GABRR3A8MPY1 467 aa19.91■□□□□ 0.78
USP39-203ENST00000409470 CACNB4O00305 520 aaPredicted RBP19.91■□□□□ 0.78
USP39-203ENST00000409470 RAP2AP10114 183 aa19.91■□□□□ 0.78
USP39-203ENST00000409470 DRD1P21728 446 aa19.91■□□□□ 0.78
USP39-203ENST00000409470 ABHD18Q0P651 414 aa19.91■□□□□ 0.78
USP39-203ENST00000409470 TMTC4Q5T4D3 741 aa19.91■□□□□ 0.78
USP39-203ENST00000409470 GALNT18Q6P9A2 607 aa19.91■□□□□ 0.78
USP39-203ENST00000409470 ARMCX6Q7L4S7 300 aa19.91■□□□□ 0.78
USP39-203ENST00000409470 EPHX4Q8IUS5 362 aa19.91■□□□□ 0.78
USP39-203ENST00000409470 ST13P4Q8IZP2 240 aaPredicted RBP19.91■□□□□ 0.78
USP39-203ENST00000409470 CLECL1Q8IZS7 167 aa19.91■□□□□ 0.78
USP39-203ENST00000409470 C10orf111Q8N326 155 aa19.91■□□□□ 0.78
USP39-203ENST00000409470 RAB42Q8N4Z0 105 aa19.91■□□□□ 0.78
USP39-203ENST00000409470 SMPDL3AQ92484 453 aa19.91■□□□□ 0.78
USP39-203ENST00000409470 INSM2Q96T92 566 aaPredicted RBP19.91■□□□□ 0.78
USP39-203ENST00000409470 SPATA7Q9P0W8 599 aa19.91■□□□□ 0.78
USP39-203ENST00000409470 SCML1Q9UN30 329 aa19.91■□□□□ 0.78
USP39-203ENST00000409470 SLC17A4Q9Y2C5 497 aa19.91■□□□□ 0.78
USP39-203ENST00000409470 BTBD3Q9Y2F9 522 aa19.91■□□□□ 0.78
USP39-203ENST00000409470 GPSM3Q9Y4H4 160 aa19.91■□□□□ 0.78
USP39-203ENST00000409470 CLIC1O00299 241 aa19.9■□□□□ 0.78
USP39-203ENST00000409470 SCN2BO60939 215 aa19.9■□□□□ 0.78
USP39-203ENST00000409470 EPN2O95208 641 aa19.9■□□□□ 0.78
USP39-203ENST00000409470 GBAP04062 536 aa19.9■□□□□ 0.78
USP39-203ENST00000409470 PIM1P11309 404 aaPredicted RBP19.9■□□□□ 0.78
USP39-203ENST00000409470 EFNA1P20827 205 aaPredicted RBP19.9■□□□□ 0.78
USP39-203ENST00000409470 GZMMP51124 257 aa19.9■□□□□ 0.78
USP39-203ENST00000409470 ZNF763Q0D2J5 394 aa19.9■□□□□ 0.78
USP39-203ENST00000409470 OR52E8Q6IFG1 317 aa19.9■□□□□ 0.78
USP39-203ENST00000409470 VPS37AQ8NEZ2 397 aa19.9■□□□□ 0.78
USP39-203ENST00000409470 VPS50Q96JG6 964 aa19.9■□□□□ 0.78
USP39-203ENST00000409470 BDH2Q9BUT1 245 aa19.9■□□□□ 0.78
USP39-203ENST00000409470 PCBD2Q9H0N5 130 aa19.9■□□□□ 0.78
USP39-203ENST00000409470 YY1AP1Q9H869 796 aa19.9■□□□□ 0.78
USP39-203ENST00000409470 IMP3Q9NV31 184 aaKnown RBP19.9■□□□□ 0.78
USP39-203ENST00000409470 SH3BP4Q9P0V3 963 aa19.9■□□□□ 0.78
USP39-203ENST00000409470 SUFUQ9UMX1 484 aa19.9■□□□□ 0.78
USP39-203ENST00000409470 ACADMP11310 421 aa19.9■□□□□ 0.78
USP39-203ENST00000409470 ENGP17813 658 aa19.9■□□□□ 0.78
USP39-203ENST00000409470 ANXA8L1Q5VT79 327 aa19.9■□□□□ 0.78
USP39-203ENST00000409470 FAM129CQ86XR2 697 aa19.9■□□□□ 0.78
USP39-203ENST00000409470 WDR48Q8TAF3 677 aa19.9■□□□□ 0.78
USP39-203ENST00000409470 REXO5Q96IC2 774 aaKnown RBP19.9■□□□□ 0.78
USP39-203ENST00000409470 BTBD1Q9H0C5 482 aa19.9■□□□□ 0.78
USP39-203ENST00000409470 SIRT5Q9NXA8 310 aa19.9■□□□□ 0.78
USP39-203ENST00000409470 FZD4Q9ULV1 537 aa19.9■□□□□ 0.78
USP39-203ENST00000409470 PLEKHM1Q9Y4G2 1056 aa19.9■□□□□ 0.78
USP39-203ENST00000409470 YY2O15391 372 aa19.89■□□□□ 0.77
USP39-203ENST00000409470 CREG1O75629 220 aa19.89■□□□□ 0.77
USP39-203ENST00000409470 IDSP22304 550 aa19.89■□□□□ 0.77
USP39-203ENST00000409470 PTX3P26022 381 aaPredicted RBP19.89■□□□□ 0.77
USP39-203ENST00000409470 PPP2CBP62714 309 aa19.89■□□□□ 0.77
USP39-203ENST00000409470 PPP2CAP67775 309 aa19.89■□□□□ 0.77
USP39-203ENST00000409470 GK3PQ14409 553 aa19.89■□□□□ 0.77
USP39-203ENST00000409470 KRT33BQ14525 404 aa19.89■□□□□ 0.77
USP39-203ENST00000409470 PYCR3Q53H96 274 aa19.89■□□□□ 0.77
USP39-203ENST00000409470 ENPP6Q6UWR7 440 aa19.89■□□□□ 0.77
USP39-203ENST00000409470 AIF1LQ9BQI0 150 aa19.89■□□□□ 0.77
USP39-203ENST00000409470 MENTQ9BUN1 341 aa19.89■□□□□ 0.77
USP39-203ENST00000409470 PELI2Q9HAT8 420 aa19.89■□□□□ 0.77
USP39-203ENST00000409470 TSC22D4Q9Y3Q8 395 aa19.89■□□□□ 0.77
USP39-203ENST00000409470 CLOCKO15516 846 aa19.88■□□□□ 0.77
USP39-203ENST00000409470 PSMB5P28074 263 aa19.88■□□□□ 0.77
USP39-203ENST00000409470 SLC14A1Q13336 389 aa19.88■□□□□ 0.77
USP39-203ENST00000409470 KIAA1324Q6UXG2 1013 aaKnown RBP19.88■□□□□ 0.77
USP39-203ENST00000409470 CAMKMTQ7Z624 323 aa19.88■□□□□ 0.77
USP39-203ENST00000409470 METTL4Q8N3J2 472 aa19.88■□□□□ 0.77
USP39-203ENST00000409470 FAM86B1Q8N7N1 296 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms