RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 KCTD5Q9NXV2 234 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 VNN3Q9NY84 501 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 SCN4AP35499 1836 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 FAM92AA1XBS5 289 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 ZNF99A8MXY4 864 aaPredicted RBP12.94□□□□□ -0.34
COL6A2-204ENST00000409416 KLK8O60259 260 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 SEC14L2O76054 403 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 SCELO95171 688 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 DBTP11182 482 aaKnown RBP12.94□□□□□ -0.34
COL6A2-204ENST00000409416 IDUAP35475 653 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 SLC6A11P48066 632 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 SEPHS1P49903 392 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 BCAP31P51572 246 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 RELAQ04206 551 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 ARHGEF6Q15052 776 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 INAQ16352 499 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 USP39Q53GS9 565 aaKnown RBP12.94□□□□□ -0.34
COL6A2-204ENST00000409416 SLC8B1Q6J4K2 584 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 NEK5Q6P3R8 708 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 DHRS4L2Q6PKH6 230 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 GDPD4Q6W3E5 623 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 SLC39A5Q6ZMH5 540 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 PGBD3Q8N328 593 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 FRMD1Q8N878 549 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 ZFP90Q8TF47 636 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 YTHDF1Q9BYJ9 559 aaKnown RBP12.94□□□□□ -0.34
COL6A2-204ENST00000409416 C6orf62Q9GZU0 229 aaPredicted RBP12.94□□□□□ -0.34
COL6A2-204ENST00000409416 DNAJC11Q9NVH1 559 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 TMEM9Q9P0T7 183 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 CDH7Q9ULB5 785 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 NCOR1O75376 2440 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 CLDN25C9JDP6 229 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 CLIC1O00299 241 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 SOX14O95416 240 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 NPPAP01160 153 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 EIF2S1P05198 315 aaKnown RBP12.94□□□□□ -0.34
COL6A2-204ENST00000409416 KLK1P06870 262 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 HTR1AP08908 422 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 GSTM2P28161 218 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 HOXD11P31277 338 aaPredicted RBP12.94□□□□□ -0.34
COL6A2-204ENST00000409416 SLC19A1P41440 591 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 CLCN4P51793 760 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 AP1S1P61966 158 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 C2orf80Q0P641 193 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 SLC14A1Q13336 389 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 CAMK2GQ13555 558 aaPredicted RBP12.94□□□□□ -0.34
COL6A2-204ENST00000409416 NFE2L1Q14494 772 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 CARD16Q5EG05 197 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 IRAK1BP1Q5VVH5 260 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 PAGE2Q7Z2X7 111 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 WDR53Q7Z5U6 358 aaPredicted RBP12.94□□□□□ -0.34
COL6A2-204ENST00000409416 DCP2Q8IU60 420 aaKnown RBP12.94□□□□□ -0.34
COL6A2-204ENST00000409416 PDPRQ8NCN5 879 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 PIK3C3Q8NEB9 887 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 RPL3LQ92901 407 aaKnown RBP12.94□□□□□ -0.34
COL6A2-204ENST00000409416 RHBDF1Q96CC6 855 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 DNAJA3Q96EY1 480 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 DACH2Q96NX9 599 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 ABCB10Q9NRK6 738 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 PAK1IP1Q9NWT1 392 aaPredicted RBP12.94□□□□□ -0.34
COL6A2-204ENST00000409416 SNX6Q9UNH7 406 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 KCNK6Q9Y257 313 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 RP1P56715 2156 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 FAM227AF5H4B4 570 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 ARNTLO00327 626 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 ANKRD28O15084 1053 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 PRSS23O95084 383 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 PAK4O96013 591 aaPredicted RBP12.94□□□□□ -0.34
COL6A2-204ENST00000409416 EPHA2P29317 976 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 CSNK1DP48730 415 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 PCYT1AP49585 367 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 CDH12P55289 794 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 PHC1P78364 1004 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 PTSQ03393 145 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 EMX1Q04741 257 aaPredicted RBP12.94□□□□□ -0.34
COL6A2-204ENST00000409416 ARHGAP15Q53QZ3 475 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 TTC23LQ6PF05 361 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 KLHL17Q6TDP4 642 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 CEP68Q76N32 757 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 OR4A15Q8NGL6 344 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 ADAMTS16Q8TE57 1224 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 SMG7Q92540 1137 aaKnown RBP12.94□□□□□ -0.34
COL6A2-204ENST00000409416 KAT2AQ92830 837 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 HMG20AQ9NP66 347 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 KRT84Q9NSB2 600 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 OR1A2Q9Y585 309 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 RTTNQ86VV8 2226 aa12.94□□□□□ -0.34
COL6A2-204ENST00000409416 DICER1Q9UPY3 1922 aaKnown RBP12.93□□□□□ -0.34
COL6A2-204ENST00000409416 H3BN98 237 aa12.93□□□□□ -0.34
COL6A2-204ENST00000409416 SERPINI2O75830 405 aa12.93□□□□□ -0.34
COL6A2-204ENST00000409416 GSTM1P09488 218 aa12.93□□□□□ -0.34
COL6A2-204ENST00000409416 ZNF12P17014 697 aa12.93□□□□□ -0.34
COL6A2-204ENST00000409416 PSMB5P28074 263 aa12.93□□□□□ -0.34
COL6A2-204ENST00000409416 SOX9P48436 509 aa12.93□□□□□ -0.34
COL6A2-204ENST00000409416 CCDC85BQ15834 202 aaPredicted RBP12.93□□□□□ -0.34
COL6A2-204ENST00000409416 PSRC1Q6PGN9 363 aaPredicted RBP12.93□□□□□ -0.34
COL6A2-204ENST00000409416 CERS6Q6ZMG9 384 aa12.93□□□□□ -0.34
COL6A2-204ENST00000409416 TPRG1Q6ZUI0 275 aa12.93□□□□□ -0.34
COL6A2-204ENST00000409416 C7orf61Q8IZ16 206 aa12.93□□□□□ -0.34
COL6A2-204ENST00000409416 UBE2J2Q8N2K1 259 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms