RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 C8orf59Q8N0T1 100 aaPredicted RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 NIPA2Q8N8Q9 360 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 ZNF527Q8NB42 609 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 GLIS1Q8NBF1 620 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 XXYLT1Q8NBI6 393 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 PSD4Q8NDX1 1056 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 OR13J1Q8NGT2 312 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 OR5H6Q8NGV6 325 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 PSMA8Q8TAA3 256 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 URGCPQ8TCY9 931 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 ZFP90Q8TF47 636 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 SOCS4Q8WXH5 440 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 HTRA1Q92743 480 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.31□□□□□ -1.566e-6■□□□□ 9.8
CLK1-202ENST00000409403 ROPN1LQ96C74 230 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 TMCO6Q96DC7 493 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 MCRS1Q96EZ8 462 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 GIMAP5Q96F15 307 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 ZNF578Q96N58 590 aaPredicted RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 PIGSQ96S52 555 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 FAM118BQ9BPY3 351 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 KCTD14Q9BQ13 255 aaPredicted RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 C17orf62Q9BQA9 187 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 MESP1Q9BRJ9 268 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 WDR83Q9BRX9 315 aaKnown RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 CCDC32Q9BV29 185 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 SLC25A23Q9BV35 468 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 FUNDC2Q9BWH2 189 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 C20orf27Q9GZN8 174 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 LHPPQ9H008 270 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 MTIF3Q9H2K0 278 aaKnown RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 DSN1Q9H410 356 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 ZNF385DQ9H6B1 395 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 LRRC40Q9H9A6 602 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 TMEM8AQ9HCN3 771 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 AGPAT4Q9NRZ5 378 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 IARS2Q9NSE4 1012 aaKnown RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 TBC1D13Q9NVG8 400 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 B3GNT2Q9NY97 397 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 VSX1Q9NZR4 365 aaPredicted RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 CHORDC1Q9UHD1 332 aaPredicted RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 TRMT6Q9UJA5 497 aaKnown RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 MKLN1Q9UL63 735 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 MAN2B2Q9Y2E5 1009 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 CHST2Q9Y4C5 530 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 LOC102723971A0A1B0GUV8 181 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 LINC00854A0A1B0GVQ3 168 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 KRTAP23-1A1A580 65 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 HMX3A6NHT5 357 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 A6NL46 340 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 GOLGA8JA6NMD2 632 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 C12orf71A8MTZ7 269 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 ZNF99A8MXY4 864 aaPredicted RBP5.3□□□□□ -1.56
CLK1-202ENST00000409403 hCG_2039718K7EN88 272 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 APOC4-APOC2K7ER74 178 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 HNRNPDLO14979 420 aaKnown RBP5.3□□□□□ -1.56
CLK1-202ENST00000409403 SYNCRIPO60506 623 aaKnown RBP5.3□□□□□ -1.56
CLK1-202ENST00000409403 PLA2G6O60733 806 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 NBNO60934 754 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 B3GALNT1O75752 331 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 RECQL4O94761 1208 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 SUPT7LO94864 414 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 INMTO95050 263 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 LSM8O95777 96 aaKnown RBP5.3□□□□□ -1.56
CLK1-202ENST00000409403 GPANK1O95872 356 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 CD4P01730 458 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 APOC2P02655 101 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 S100A6P06703 90 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 GNAO1P09471 354 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 ARP10275 920 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 IL7P13232 177 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 AKR1B1P15121 316 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 ATF6P18850 670 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 CHRM3P20309 590 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 DNAJB1P25685 340 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 HADHAP40939 763 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 ARCN1P48444 511 aaKnown RBP5.3□□□□□ -1.56
CLK1-202ENST00000409403 SERPINH1P50454 418 aaKnown RBP5.3□□□□□ -1.56
CLK1-202ENST00000409403 CLCNKBP51801 687 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 MLLT10P55197 1068 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 YWHAZP63104 245 aaKnown RBP5.3□□□□□ -1.56
CLK1-202ENST00000409403 GSTO1P78417 241 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 ADARB1P78563 741 aaKnown RBP5.3□□□□□ -1.56
CLK1-202ENST00000409403 HSD11B2P80365 405 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 IFITM3Q01628 133 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 PRKCDQ05655 676 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 PEX6Q13608 980 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 BOP1Q14137 746 aaKnown RBP5.3□□□□□ -1.56
CLK1-202ENST00000409403 TFDP2Q14188 446 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 PDK2Q15119 407 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 TSC22D1Q15714 1073 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 C4orf46Q504U0 113 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 PLA1AQ53H76 456 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 SLC9A4Q6AI14 798 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 TIGD3Q6B0B8 471 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 HMBOX1Q6NT76 420 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 SLC16A12Q6ZSM3 486 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 CREB3L2Q70SY1 520 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 NIPA1Q7RTP0 329 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 GDF7Q7Z4P5 450 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms