RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 ARF3P61204 181 aaPredicted RBP13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 C3orf38Q5JPI3 329 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 GRHL2Q6ISB3 625 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 TMIGD1Q6UXZ0 262 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 MCATQ8IVS2 390 aaKnown RBP13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 D2HGDHQ8N465 521 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 DNAJC22Q8N4W6 341 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 DTWD1Q8N5C7 304 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 WDR48Q8TAF3 677 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 N4BP2L2Q92802 583 aaPredicted RBP13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 THOC1Q96FV9 657 aaKnown RBP13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 OR6C1Q96RD1 312 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 DPYSL5Q9BPU6 564 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 ZFYVE21Q9BQ24 234 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 CCDC134Q9H6E4 229 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 PNPOQ9NVS9 261 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 PIEZO1Q92508 2521 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 TRBC2A0A5B9 178 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 TMEM114B3SHH9 223 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 TCP11X1B4DZS4 312 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 SKAP2O75563 359 aaPredicted RBP13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 ANKRD34CP0C6C1 535 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 SPINK2P20155 84 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 GRK2P25098 689 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 HMOX2P30519 316 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 ETV5P41161 510 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 GABRA4P48169 554 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 TUBB3Q13509 450 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 HKDC1Q2TB90 917 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 LIPJQ5W064 366 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 ATG16L1Q676U5 607 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 MED27Q6P2C8 311 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 RNF44Q7L0R7 432 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 VN1R5Q7Z5H4 357 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 KRT78Q8N1N4 520 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 L3MBTL4Q8NA19 623 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 OR7G3Q8NG95 312 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 METTL6Q8TCB7 284 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 WDR34Q96EX3 536 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 MAGEB18Q96M61 343 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 DEPDC7Q96QD5 511 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 OR2A5Q96R48 311 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 EFCAB11Q9BUY7 163 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 SPRTNQ9H040 489 aaPredicted RBP13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 FGF21Q9NSA1 209 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 SEMA5BQ9P283 1151 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 LOXL2Q9Y4K0 774 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 PCDHGA4Q9Y5G9 962 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 SAP18O00422 153 aaKnown RBP13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 SNNO75324 88 aaPredicted RBP13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 FKBP9O95302 570 aa13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 B3GALT4O96024 378 aa13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 TGFB1P01137 390 aa13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 PDYNP01213 254 aa13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 EZRP15311 586 aaKnown RBP13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 CCKBRP32239 447 aa13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 CASP2P42575 452 aa13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 SCTRP47872 440 aa13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 MAPK10P53779 464 aa13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 PKNOX1P55347 436 aa13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 FOXC1Q12948 553 aa13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 TBCCQ15814 346 aa13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 CLPPQ16740 277 aaPredicted RBP13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 PAGE2BQ5JRK9 111 aa13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 VN1R4Q7Z5H5 301 aa13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 TRIM42Q8IWZ5 723 aa13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 AGBL5Q8NDL9 886 aa13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 OR1L3Q8NH93 324 aa13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 HUS1BQ8NHY5 278 aa13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 EHD1Q9H4M9 534 aa13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 EML4Q9HC35 981 aaKnown RBP13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 THAP1Q9NVV9 213 aa13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 PISDQ9UG56 409 aa13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 TRPS1Q9UHF7 1281 aa13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 SATB2Q9UPW6 733 aa13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 KLK4Q9Y5K2 254 aa13.48□□□□□ -0.25
CHRNA1-204ENST00000409323 A0A0G2JN53 185 aa13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 MAGEB17A8MXT2 336 aa13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 MANBAO00462 879 aa13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 AZIN1O14977 448 aa13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 TOX3O15405 576 aaPredicted RBP13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 NDUFS4O43181 175 aa13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 MAP3K7O43318 606 aa13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 TIAF1O95411 115 aa13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 JUNP05412 331 aaKnown RBP13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 HRH2P25021 359 aa13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 RPS15AP62244 130 aaKnown RBP13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 OCRLQ01968 901 aa13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 TRA2AQ13595 282 aaKnown RBP eCLIP13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 ABRAXAS2Q15018 415 aa13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 PDCD2Q16342 344 aaPredicted RBP13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 HIST2H2ACQ16777 129 aaPredicted RBP13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 WASHC2DQ5SRD0 308 aa13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 TMTC4Q5T4D3 741 aa13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 HIST2H2AA3Q6FI13 130 aa13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 RAB11FIP2Q7L804 512 aa13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 ZNF655Q8N720 491 aaPredicted RBP13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 MFSD9Q8NBP5 474 aa13.47□□□□□ -0.25
CHRNA1-204ENST00000409323 KCT2Q8NC54 265 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms