RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 IRGCQ6NXR0 463 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 TICAM1Q8IUC6 712 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 WDR92Q96MX6 357 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 PRPF18Q99633 342 aaKnown RBP18.23■□□□□ 0.51
USP39-202ENST00000409025 SEMA6AQ9H2E6 1030 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 OR51B5Q9H339 312 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 IKZF5Q9H5V7 419 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 SLC6A13Q9NSD5 602 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 GSTA4O15217 222 aa18.22■□□□□ 0.51
USP39-202ENST00000409025 APBB3O95704 486 aa18.22■□□□□ 0.51
USP39-202ENST00000409025 GSNP06396 782 aa18.22■□□□□ 0.51
USP39-202ENST00000409025 GGT1P19440 569 aa18.22■□□□□ 0.51
USP39-202ENST00000409025 ERMP1Q7Z2K6 904 aa18.22■□□□□ 0.51
USP39-202ENST00000409025 COMMD6Q7Z4G1 85 aa18.22■□□□□ 0.51
USP39-202ENST00000409025 DTWD1Q8N5C7 304 aa18.22■□□□□ 0.51
USP39-202ENST00000409025 ABHD11Q8NFV4 315 aa18.22■□□□□ 0.51
USP39-202ENST00000409025 EME1Q96AY2 570 aa18.22■□□□□ 0.51
USP39-202ENST00000409025 BIRC7Q96CA5 298 aa18.22■□□□□ 0.51
USP39-202ENST00000409025 CCDC115Q96NT0 180 aa18.22■□□□□ 0.51
USP39-202ENST00000409025 BTBD9Q96Q07 612 aa18.22■□□□□ 0.51
USP39-202ENST00000409025 CPPED1Q9BRF8 314 aaPredicted RBP18.22■□□□□ 0.51
USP39-202ENST00000409025 RPF2Q9H7B2 306 aaKnown RBP18.22■□□□□ 0.51
USP39-202ENST00000409025 POLMQ9NP87 494 aaPredicted RBP18.22■□□□□ 0.51
USP39-202ENST00000409025 PRDM8Q9NQV8 689 aa18.22■□□□□ 0.51
USP39-202ENST00000409025 ANAPC2Q9UJX6 822 aa18.22■□□□□ 0.51
USP39-202ENST00000409025 CA5BQ9Y2D0 317 aa18.22■□□□□ 0.51
USP39-202ENST00000409025 SZT2Q5T011 3432 aa18.22■□□□□ 0.51
USP39-202ENST00000409025 ANKDD1BA6NHY2 528 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 SCAMP1O15126 338 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 SRFP11831 508 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 UQCRBP14927 111 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 HOXB9P17482 250 aaPredicted RBP18.21■□□□□ 0.51
USP39-202ENST00000409025 PSMB5P28074 263 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 PTPN6P29350 595 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 PKLRP30613 574 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 CDKN2CP42773 168 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 WNT3P56703 355 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 ZNF763Q0D2J5 394 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 TMEM31Q5JXX7 168 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 CPTPQ5TA50 214 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 ANO7Q6IWH7 933 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 ARMCX6Q7L4S7 300 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 PGBD3Q8N328 593 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 METTL4Q8N3J2 472 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 LINC01555Q8NAE3 123 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 OR2L8Q8NGY9 312 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 OR1E3Q8WZA6 343 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 BMFQ96LC9 184 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 PANX1Q96RD7 426 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 DUSP26Q9BV47 211 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 PITHD1Q9GZP4 211 aaPredicted RBP18.21■□□□□ 0.51
USP39-202ENST00000409025 RHBGQ9H310 441 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 KAT8Q9H7Z6 458 aaKnown RBP18.21■□□□□ 0.51
USP39-202ENST00000409025 SLC2A4RGQ9NR83 387 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 CUEDC1Q9NWM3 386 aaPredicted RBP18.21■□□□□ 0.51
USP39-202ENST00000409025 CNOT11Q9UKZ1 510 aaKnown RBP18.21■□□□□ 0.51
USP39-202ENST00000409025 HEBP2Q9Y5Z4 205 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 MYO10Q9HD67 2058 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 ELOVL7A1L3X0 281 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 OR52A4PA6NMU1 304 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 H0Y8X5 98 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 SAP18O00422 153 aaKnown RBP18.21■□□□□ 0.51
USP39-202ENST00000409025 KDM1AO60341 852 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 B3GALT4O96024 378 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 ANXA6P08133 673 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 OXTRP30559 389 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 SERPINB1P30740 379 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 AKT2P31751 481 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 POLE2P56282 527 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 KLC1Q07866 573 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 SKIV2LQ15477 1246 aaKnown RBP18.21■□□□□ 0.51
USP39-202ENST00000409025 CCDC85BQ15834 202 aaPredicted RBP18.21■□□□□ 0.51
USP39-202ENST00000409025 RPE65Q16518 533 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 MTX3Q5HYI7 312 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 HMBOX1Q6NT76 420 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 GCNT7Q6ZNI0 430 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 VN1R5Q7Z5H4 357 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 CAMKMTQ7Z624 323 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 AMIGO2Q86SJ2 522 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 ZNF548Q8NEK5 533 aaPredicted RBP18.21■□□□□ 0.51
USP39-202ENST00000409025 TRPV3Q8NET8 790 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 VPS37AQ8NEZ2 397 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 FLCNQ8NFG4 579 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 SNX19Q92543 992 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 CXorf40BQ96DE9 158 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 FAM120BQ96EK7 910 aaKnown RBP18.21■□□□□ 0.51
USP39-202ENST00000409025 XKR8Q9H6D3 395 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 NT5DC2Q9H857 520 aa18.21■□□□□ 0.51
USP39-202ENST00000409025 GABRR3A8MPY1 467 aa18.2■□□□□ 0.5
USP39-202ENST00000409025 FAM220BPB1ANY3 271 aa18.2■□□□□ 0.5
USP39-202ENST00000409025 MAN2B1O00754 1011 aa18.2■□□□□ 0.5
USP39-202ENST00000409025 SCN2BO60939 215 aa18.2■□□□□ 0.5
USP39-202ENST00000409025 SEMA4FO95754 770 aa18.2■□□□□ 0.5
USP39-202ENST00000409025 LAMP1P11279 417 aa18.2■□□□□ 0.5
USP39-202ENST00000409025 FCGR1AP12314 374 aa18.2■□□□□ 0.5
USP39-202ENST00000409025 FASP25445 335 aa18.2■□□□□ 0.5
USP39-202ENST00000409025 REEP5Q00765 189 aa18.2■□□□□ 0.5
USP39-202ENST00000409025 TDGQ13569 410 aa18.2■□□□□ 0.5
USP39-202ENST00000409025 ANXA8L1Q5VT79 327 aa18.2■□□□□ 0.5
USP39-202ENST00000409025 ANKRD26P1Q6NSI1 321 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms