RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ZBTB44Q8NCP5 570 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 FAM46BQ96A09 425 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 CFAP36Q96G28 342 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 C16orf45Q96MC5 204 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 KCNK16Q96T55 309 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 DDX50Q9BQ39 737 aaKnown RBP4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 ZNF577Q9BSK1 485 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 TRAF4Q9BUZ4 470 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 IDI2Q9BXS1 227 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 TEX13AQ9BXU3 409 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 SDCBP2Q9H190 292 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 CARD9Q9H257 536 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 TMEM245Q9H330 911 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 CUEDC2Q9H467 287 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 ZDHHC6Q9H6R6 413 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 FKRPQ9H9S5 495 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 KCNMB3Q9NPA1 279 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 SPASTQ9UBP0 616 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 UBQLN2Q9UHD9 624 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 ZNF510Q9Y2H8 683 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 CLCA3PQ9Y6N3 262 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 TRAV18A0A075B6X5 111 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 HNRNPCL2B2RXH8 293 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 K7EPI3 171 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 CPLX1O14810 134 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 SCO2O43819 266 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 CTSVO60911 334 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 AREGP15514 252 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 RPA1P27694 616 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 SFNP31947 248 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 DUTP33316 252 aaKnown RBP4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 CAMLGP49069 296 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 FUT6P51993 359 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 RPL36AP83881 106 aaKnown RBP4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 GAGE5Q13069 117 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 GAGE6Q13070 117 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 TAF7Q15545 349 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 INAQ16352 499 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 GALNT17Q6IS24 598 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 SPSB3Q6PJ21 355 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 ABRAXAS1Q6UWZ7 409 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 SIGLEC15Q6ZMC9 328 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 ZNF554Q86TJ5 538 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 ADCK1Q86TW2 530 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 SFR1Q86XK3 245 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 TMEM126BQ8IUX1 230 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 KDM8Q8N371 416 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 MAPKAPK5-AS1Q8N8E1 139 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 KCNH5Q8NCM2 988 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 OR2T12Q8NG77 320 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 OR1J1Q8NGS3 322 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 PHLDA1Q8WV24 401 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 SLCO4A1Q96BD0 722 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 BICD1Q96G01 975 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 PRMT1Q99873 361 aaKnown RBP4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 CCDC3Q9BQI4 270 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 SLC39A8Q9C0K1 460 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 NYXQ9GZU5 481 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 LAT2Q9GZY6 243 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 NAPBQ9H115 298 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 SDR39U1Q9NRG7 319 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 SLC38A7Q9NVC3 462 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 DNPEPQ9ULA0 475 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 STUB1Q9UNE7 303 aa4.49□□□□□ -1.69
HMGB1P13-201ENST00000406019 IL16Q14005 1332 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 TMEM129A0AVI4 362 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 MAGEB16A2A368 324 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 ASPDHA6ND91 283 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 C2orf81A6NN90 581 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 VGLL3A8MV65 326 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 KPNA7A9QM74 516 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 CCL24O00175 119 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 NDC80O14777 642 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 XPNPEP2O43895 674 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 ACSL4O60488 711 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 PIGNO95427 931 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 IGHV4-39P01824 125 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 APOHP02749 345 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 MMP10P09238 476 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 SKILP12757 684 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 F3P13726 295 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 CA4P22748 312 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 SSTR1P30872 391 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 ZNF131P52739 623 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 MAZP56270 477 aaKnown RBP4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 KRTAP10-6P60371 365 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 PITX1P78337 314 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 LGALS3BPQ08380 585 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 PTPN14Q15678 1187 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 EPC2Q52LR7 807 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 FAM76BQ5HYJ3 339 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 FUT10Q6P4F1 479 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 B3GLCTQ6Y288 498 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 ADAMTSL2Q86TH1 951 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 CUZD1Q86UP6 607 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 TDHQ8IZJ6 230 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 CCDC63Q8NA47 563 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 OR52N5Q8NH56 324 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 TSACCQ96A04 125 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 ALG14Q96F25 216 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms