RNA–Protein interactions for RNA: ENST00000405805.5

HMGB1-206, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HMGB1, Length 4,199 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-206ENST00000405805 CACNG1Q06432 222 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 HKDC1Q2TB90 917 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 PTCHD3Q3KNS1 767 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 DESI1Q6ICB0 168 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 HACD2Q6Y1H2 254 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 DCP2Q8IU60 420 aaKnown RBP11.58□□□□□ -0.56
HMGB1-206ENST00000405805 ADGRG2Q8IZP9 1017 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 LMNTD1Q8N9Z9 388 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 OR4K1Q8NGD4 311 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 AUTS2Q8WXX7 1259 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 KCNN1Q92952 543 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 TMEM169Q96HH4 297 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 MAGEH1Q9H213 219 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 C11orf16Q9NQ32 467 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 RPS6KA6Q9UK32 745 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 PCDHB14Q9Y5E9 798 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 APOL3O95236 402 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 PROS1P07225 676 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 ATXN1LP0C7T5 689 aaKnown RBP11.58□□□□□ -0.56
HMGB1-206ENST00000405805 TNNI3P19429 210 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 CRHBPP24387 322 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 GPC1P35052 558 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 EMP3P54852 163 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 TMBIM6P55061 237 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 MCCD1P59942 119 aaPredicted RBP11.58□□□□□ -0.56
HMGB1-206ENST00000405805 DSG2Q14126 1118 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 KRT33BQ14525 404 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 CLPPQ16740 277 aaPredicted RBP11.58□□□□□ -0.56
HMGB1-206ENST00000405805 SNX20Q7Z614 316 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 TAF8Q7Z7C8 310 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 RBM23Q86U06 439 aaKnown RBP11.58□□□□□ -0.56
HMGB1-206ENST00000405805 ZNF614Q8N883 585 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 RHEBL1Q8TAI7 183 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 CHPT1Q8WUD6 406 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 RTP3Q9BQQ7 232 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 CNPPD1Q9BV87 410 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 SLC2A11Q9BYW1 496 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 GPBP1L1Q9HC44 474 aaPredicted RBP11.58□□□□□ -0.56
HMGB1-206ENST00000405805 ANKMY1Q9P2S6 941 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 ATAD5Q96QE3 1844 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 HAT1O14929 419 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 UGT2B11O75310 529 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 IFNA14P01570 189 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 FGF4P08620 206 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 DSTNP60981 165 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 RAB41Q5JT25 222 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 TPRG1LQ5T0D9 272 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 TRIM69Q86WT6 500 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 CLECL1Q8IZS7 167 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 BEND7Q8N7W2 519 aaPredicted RBP11.58□□□□□ -0.56
HMGB1-206ENST00000405805 MYEOVQ96EZ4 313 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 PYURFQ96I23 114 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 TIGARQ9NQ88 270 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 DOCK3Q8IZD9 2030 aa11.58□□□□□ -0.56
HMGB1-206ENST00000405805 A0A096LPI6 279 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 MAGEB17A8MXT2 336 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 PLK4O00444 970 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 CYP2A7P20853 494 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 C21orf33P30042 268 aaPredicted RBP11.57□□□□□ -0.56
HMGB1-206ENST00000405805 RRM2P31350 389 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 NNMTP40261 264 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 ZNF33AQ06730 810 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 GNA13Q14344 377 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 PLEKHG6Q3KR16 790 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 PTCHD4Q6ZW05 846 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 SPATC1Q76KD6 591 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 TMPRSS11BQ86T26 416 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 SERINC5Q86VE9 423 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 SLC38A6Q8IZM9 456 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 FAM109AQ8N4B1 249 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 CHDHQ8NE62 594 aaPredicted RBP11.57□□□□□ -0.56
HMGB1-206ENST00000405805 RNFT2Q96EX2 444 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 MAP6Q96JE9 813 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 PDCD10Q9BUL8 212 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 TLR9Q9NR96 1032 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 TMEM9Q9P0T7 183 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 EIF3KQ9UBQ5 218 aaKnown RBP11.57□□□□□ -0.56
HMGB1-206ENST00000405805 B8ZZF3 427 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 SSX5O60225 188 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 OR10H3O60404 316 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 ANXA4P09525 319 aaPredicted RBP11.57□□□□□ -0.56
HMGB1-206ENST00000405805 PTNP21246 168 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 EMX1Q04741 257 aaPredicted RBP11.57□□□□□ -0.56
HMGB1-206ENST00000405805 DEF8Q6ZN54 512 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 DNAJB7Q7Z6W7 309 aaPredicted RBP11.57□□□□□ -0.56
HMGB1-206ENST00000405805 CYP4Z1Q86W10 505 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 SLC5A11Q8WWX8 675 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 SH3YL1Q96HL8 342 aaPredicted RBP11.57□□□□□ -0.56
HMGB1-206ENST00000405805 DIRAS2Q96HU8 199 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 HSH2DQ96JZ2 352 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 RACGAP1Q9H0H5 632 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 ZNF385DQ9H6B1 395 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 SNTG1Q9NSN8 517 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 THUMPD1Q9NXG2 353 aaKnown RBP11.57□□□□□ -0.56
HMGB1-206ENST00000405805 TAS2R9Q9NYW1 312 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 GPRC5BQ9NZH0 403 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 CRNNQ9UBG3 495 aaPredicted RBP11.57□□□□□ -0.56
HMGB1-206ENST00000405805 A0A0G2JN53 185 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 HAS3O00219 553 aa11.57□□□□□ -0.56
HMGB1-206ENST00000405805 SOX14O95416 240 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms