RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 MSL3P1P0C860 447 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 MTHFD2P13995 350 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 CPA3P15088 417 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 PVRP15151 417 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 EZRP15311 586 aaKnown RBP10.11□□□□□ -0.79
RPAIN-204ENST00000405578 NPPBP16860 134 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 GRIA3P42263 894 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 GDF5P43026 501 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 RELAQ04206 551 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 TUBB3Q13509 450 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 C16orf72Q14CZ0 275 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 PCBP2Q15366 365 aaKnown RBP eCLIP10.11□□□□□ -0.79
RPAIN-204ENST00000405578 PAGE2BQ5JRK9 111 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 DCAF12Q5T6F0 453 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 AGBL2Q5U5Z8 902 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 CRYBG3Q68DQ2 2970 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 ATCAYQ86WG3 371 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 GPR135Q8IZ08 494 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 C9orf43Q8TAL5 461 aaPredicted RBP10.11□□□□□ -0.79
RPAIN-204ENST00000405578 RERGQ96A58 199 aaPredicted RBP10.11□□□□□ -0.79
RPAIN-204ENST00000405578 PPM1MQ96MI6 270 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 TEFMQ96QE5 360 aaKnown RBP10.11□□□□□ -0.79
RPAIN-204ENST00000405578 PLCD4Q9BRC7 762 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 ZPBPQ9BS86 351 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 KLHL25Q9H0H3 589 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 TMBIM4Q9HC24 238 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 PRM3Q9NNZ6 103 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 KCNK9Q9NPC2 374 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 FBXO8Q9NRD0 319 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 FGF21Q9NSA1 209 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 IRAK4Q9NWZ3 460 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 SLC39A1Q9NY26 324 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 SERTAD3Q9UJW9 196 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 RARRES3Q9UL19 164 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 PLCL2Q9UPR0 1127 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 FBN2P35556 2912 aa10.11□□□□□ -0.79
RPAIN-204ENST00000405578 ARHGEF17Q96PE2 2063 aaPredicted RBP10.1□□□□□ -0.79
RPAIN-204ENST00000405578 OR2A25A4D2G3 310 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 A8MT66 165 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 H7BY64 318 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 TM9SF1O15321 606 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 SRPX2O60687 465 aaPredicted RBP10.1□□□□□ -0.79
RPAIN-204ENST00000405578 AGFG2O95081 481 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 ZWINTO95229 277 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 PROCP04070 461 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 EBLN1P0CF75 366 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 CDH1P12830 882 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 EEF1DP29692 281 aaKnown RBP10.1□□□□□ -0.79
RPAIN-204ENST00000405578 ARL1P40616 181 aaPredicted RBP10.1□□□□□ -0.79
RPAIN-204ENST00000405578 AGTR2P50052 363 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 PRKAA2P54646 552 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 RPS15AP62244 130 aaKnown RBP10.1□□□□□ -0.79
RPAIN-204ENST00000405578 HERVK_113P63132 956 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 MC2RQ01718 297 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 IRF8Q02556 426 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 GPS2Q13227 327 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 HIST2H2ACQ16777 129 aaPredicted RBP10.1□□□□□ -0.79
RPAIN-204ENST00000405578 HSP90B2PQ58FF3 399 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 TCTE1Q5JU00 501 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 CFAP157Q5JU67 520 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 HIST2H2AA3Q6FI13 130 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 NXPE4Q6UWF7 544 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 CEACAM20Q6UY09 585 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 ZYG11AQ6WRX3 759 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 CDHR3Q6ZTQ4 885 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 TMPRSS11BQ86T26 416 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 EXOC3L1Q86VI1 746 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 FAM20CQ8IXL6 584 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 KRT78Q8N1N4 520 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 TEX9Q8N6V9 391 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 ZNF655Q8N720 491 aaPredicted RBP10.1□□□□□ -0.79
RPAIN-204ENST00000405578 ARMC2Q8NEN0 867 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 ABHD11Q8NFV4 315 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 TCP10LQ8TDR4 215 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 NEIL2Q969S2 332 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 UBE2E3Q969T4 207 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 ATP6V1E2Q96A05 226 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 THAP11Q96EK4 314 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 MAGEB10Q96LZ2 347 aaPredicted RBP10.1□□□□□ -0.79
RPAIN-204ENST00000405578 PRAP1Q96NZ9 151 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 FAM111AQ96PZ2 611 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 OR6C1Q96RD1 312 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 TAAR9Q96RI9 348 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 ZFYVE21Q9BQ24 234 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 AIF1LQ9BQI0 150 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 TMEM79Q9BSE2 394 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 ERVK-6Q9BXR3 956 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 NLNQ9BYT8 704 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 B3GNT4Q9C0J1 378 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 SLC7A5P2Q9GIP4 190 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 EHD1Q9H4M9 534 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 PELI2Q9HAT8 420 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 NKIRAS1Q9NYS0 192 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 STK38LQ9Y2H1 464 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 KLHL20Q9Y2M5 609 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 ESPL1Q14674 2120 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 PIKFYVEQ9Y2I7 2098 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 CELSR2Q9HCU4 2923 aa10.1□□□□□ -0.79
RPAIN-204ENST00000405578 HMGB1P1B2RPK0 211 aaPredicted RBP10.09□□□□□ -0.79
RPAIN-204ENST00000405578 TXNDC9O14530 226 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms