RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 KIR2DS3Q14952 304 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 HLA-BQ31612 363 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 AMZ1Q400G9 498 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 TIGD2Q4W5G0 525 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 TRIM61Q5EBN2 209 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 NOXRED1Q6NXP6 359 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 IRGCQ6NXR0 463 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 ZFAND4Q86XD8 727 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 FUNDC1Q8IVP5 155 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 LAS2Q8IYD9 372 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 KYQ8NBH2 561 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 CMTM7Q96FZ5 175 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 EGLN2Q96KS0 407 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 OR2A14Q96R47 310 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 GTPBP2Q9BX10 602 aaKnown RBP3.56□□□□□ -1.84
RTN4-208ENST00000404909 SORBS1Q9BX66 1292 aaKnown RBP3.56□□□□□ -1.84
RTN4-208ENST00000404909 DPY30Q9C005 99 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 LRMDAQ9H2I8 198 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 IL21RQ9HBE5 538 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 MRGBPQ9NV56 204 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 KLHL3Q9UH77 587 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 GMEB2Q9UKD1 530 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 RP1P56715 2156 aa3.56□□□□□ -1.84
RTN4-208ENST00000404909 SEC16AO15027 2179 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 A0A0J9YVX5 310 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 ARHGAP10A1A4S6 786 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 C2orf74A8MZ97 194 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 RTCAO00442 366 aaKnown RBP3.55□□□□□ -1.84
RTN4-208ENST00000404909 ANGPT2O15123 496 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 SLC22A2O15244 555 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 NDUFS4O43181 175 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 PRICKLE3O43900 615 aaPredicted RBP3.55□□□□□ -1.84
RTN4-208ENST00000404909 NOBOXO60393 691 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 HNRNPCL1O60812 293 aaKnown RBP3.55□□□□□ -1.84
RTN4-208ENST00000404909 MYO1DO94832 1006 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 UBXN7O94888 489 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 ANXA4P09525 319 aaPredicted RBP3.55□□□□□ -1.84
RTN4-208ENST00000404909 ADSLP30566 484 aaPredicted RBP3.55□□□□□ -1.84
RTN4-208ENST00000404909 BCL6P41182 706 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 RAP1GDS1P52306 607 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 POLR2JP52435 117 aaKnown RBP3.55□□□□□ -1.84
RTN4-208ENST00000404909 DGKQP52824 942 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 PLA2G16P53816 162 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 REEP5Q00765 189 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 STX5Q13190 355 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 KIAA0040Q15053 153 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 MAPRE2Q15555 327 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 NKAIN2Q5VXU1 208 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 SPESP1Q6UW49 350 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 PRR23CQ6ZRP0 262 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 ASRGL1Q7L266 308 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 VN1R5Q7Z5H4 357 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 OOSP2Q86WS3 158 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 DEFB107AQ8IZN7 70 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 TBC1D19Q8N5T2 526 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 EFCAB3Q8N7B9 438 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 Q8N9G6 341 aaPredicted RBP3.55□□□□□ -1.84
RTN4-208ENST00000404909 PROKR1Q8TCW9 393 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 ZFPM2Q8WW38 1151 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 F2RL3Q96RI0 385 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 ZBTB18Q99592 522 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 THTPAQ9BU02 230 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 SLC25A23Q9BV35 468 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 BRINP2Q9C0B6 783 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 GAREM1Q9H706 876 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 EFCAB1Q9HAE3 211 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 BRF2Q9HAW0 419 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 TMEM184CQ9NVA4 438 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 NMRK1Q9NWW6 199 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 LRIT1Q9P2V4 623 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 PACSIN3Q9UKS6 424 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 SNX7Q9UNH6 387 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 R4GN57 208 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 MUC6Q6W4X9 2439 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 LRP4O75096 1905 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 ZFHX2Q9C0A1 2572 aaPredicted RBP3.55□□□□□ -1.84
RTN4-208ENST00000404909 NUP214P35658 2090 aaPredicted RBP3.55□□□□□ -1.84
RTN4-208ENST00000404909 OR5K3A6NET4 321 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 CCDC154A6NI56 674 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 FOXE1O00358 373 aaPredicted RBP3.55□□□□□ -1.84
RTN4-208ENST00000404909 EIF2S1P05198 315 aaKnown RBP3.55□□□□□ -1.84
RTN4-208ENST00000404909 KLK1P06870 262 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 KRT16P08779 473 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 HSD3B1P14060 373 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 SDC1P18827 310 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 CAPN3P20807 821 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 CDH3P22223 829 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 PTX3P26022 381 aaPredicted RBP3.55□□□□□ -1.84
RTN4-208ENST00000404909 HSD3B2P26439 372 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 MAPK1P28482 360 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 IL12AP29459 219 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 PRDX6P30041 224 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 PGM1P36871 562 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 PIK3CBP42338 1070 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 FASLGP48023 281 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 ACADVLP49748 655 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 ATP4BP51164 291 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 CORO7P57737 925 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 E2F2Q14209 437 aa3.55□□□□□ -1.84
RTN4-208ENST00000404909 DUOXA1Q1HG43 343 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms