RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 IRX3P78415 501 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 DMPKQ09013 629 aa4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 HSPB3Q12988 150 aa4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 GAGE5Q13069 117 aa4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 GAGE6Q13070 117 aa4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 ORC2Q13416 577 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 CCL15Q16663 113 aa4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 VWC2Q2TAL6 325 aa4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 MDH1BQ5I0G3 518 aa4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 KRT80Q6KB66 452 aa4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 GDPD4Q6W3E5 623 aa4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 NFE4Q86UQ8 179 aa4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 NR2C2APQ86WQ0 139 aa4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 BLIDQ8IZY5 108 aa4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 ARHGAP24Q8N264 748 aa4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 CPSF7Q8N684 471 aaKnown RBP4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 METTL27Q8N6F8 245 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 OLIG1Q8TAK6 271 aa4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 RNF128Q8TEB7 428 aa4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 ZNF473Q8WTR7 871 aaKnown RBP4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 MRPS27Q92552 414 aaKnown RBP4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 ST6GAL2Q96JF0 529 aa4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 ZNF396Q96N95 335 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 PSD2Q9BQI7 771 aa4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 AP1M1Q9BXS5 423 aa4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 TEX13BQ9BXU2 312 aa4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 WNT5BQ9H1J7 359 aa4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 TFB2MQ9H5Q4 396 aaKnown RBP4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 PSTPIP2Q9H939 334 aa4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 KCNG2Q9UJ96 466 aa4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 CFAP45Q9UL16 551 aa4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 RNF150Q9ULK6 438 aa4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 ISY1Q9ULR0 285 aaKnown RBP4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 KCNJ14Q9UNX9 436 aa4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 GRIP1Q9Y3R0 1128 aa4.61□□□□□ -1.67
HMGB3P19-201ENST00000403971 LRRC37A2A6NM11 1700 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 DOCK5Q9H7D0 1870 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 MYH11P35749 1972 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 H7C0S8 307 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 SLC25A27O95847 323 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 CYP11B2P19099 503 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 PTMSP20962 102 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 MPZP25189 248 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 PTPN3P26045 913 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 RPS18P62269 152 aaKnown RBP4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 POU3F1Q03052 451 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 RBBP5Q15291 538 aaKnown RBP4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 ZRSR1Q15695 479 aaKnown RBP4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 TCP11X2Q5H9J9 407 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 CORO6Q6QEF8 472 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 MOXD1Q6UVY6 613 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 C18orf65Q6ZTR6 163 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 TMPRSS11BQ86T26 416 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 COMMD2Q86X83 199 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 CRYGNQ8WXF5 182 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 PIBF1Q8WXW3 757 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 ZNF354BQ96LW1 612 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 BTBD10Q9BSF8 475 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 VN1R1Q9GZP7 353 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 Q9N2K0 584 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 MYNNQ9NPC7 610 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 TCF7L2Q9NQB0 619 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 OLFML3Q9NRN5 406 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 CCPG1Q9ULG6 757 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 NOL7Q9UMY1 257 aaKnown RBP4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 PADI2Q9Y2J8 665 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 CCL27Q9Y4X3 112 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 ELP1O95163 1332 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 NOTCH4Q99466 2003 aa4.6□□□□□ -1.67
HMGB3P19-201ENST00000403971 E9PI62 339 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 BMPR1BO00238 502 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 PDHXO00330 501 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 PFASO15067 1338 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 LMX1BO60663 402 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 YEATS4O95619 227 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 NR3C1P04150 777 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 OR52Z1P0C646 297 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 POLR2MP0CAP2 368 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 GCFC2P16383 781 aaKnown RBP4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 EEF1DP29692 281 aaKnown RBP4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 CCNA1P78396 465 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 FRMPD4Q14CM0 1322 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 NONOQ15233 471 aaKnown RBP eCLIP4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 DEFB115Q30KQ5 88 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 USH1GQ495M9 461 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 CST9LP1Q5W188 147 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 SNRNP48Q6IEG0 339 aaKnown RBP4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 FAM198BQ6UWH4 519 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 ZBTB49Q6ZSB9 765 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 GPALPP1Q8IXQ4 340 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 CFAP206Q8IYR0 622 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 ZNF843Q8N446 348 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 OR13J1Q8NGT2 312 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 FGFBP3Q8TAT2 258 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 SLAMF9Q96A28 289 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 SCRN2Q96FV2 425 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 MBOAT7Q96N66 472 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 SFXN2Q96NB2 322 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 USP28Q96RU2 1077 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 PARK7Q99497 189 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms