RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 OR51Q1Q8NH59 317 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 SEC16BQ96JE7 1060 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 CCDC42Q96M95 316 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 PKP4Q99569 1192 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 RBCK1Q9BYM8 510 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 TRIM45Q9H8W5 580 aaPredicted RBP11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 LANCL2Q9NS86 450 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 COQ3Q9NZJ6 369 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 SPATA7Q9P0W8 599 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 TAC3Q9UHF0 121 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 ST6GALNAC2Q9UJ37 374 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 EFR3BQ9Y2G0 817 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 L3MBTL1Q9Y468 752 aa11.17□□□□□ -0.62
SPTLC1P3-201ENST00000403408 ARID1AO14497 2285 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 CUBNO60494 3623 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 SONP18583 2426 aaKnown RBP11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 TCRBV7S2A1N4TA0A589 114 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 SGK494L7N484 410 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 PRPF4O43172 522 aaKnown RBP eCLIP11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 PROM1O43490 865 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 HS6ST1O60243 411 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 KLK8O60259 260 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 MFAP3LO75121 409 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 CTAG2O75638 210 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 STK10O94804 968 aaKnown RBP11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 MBD3O95983 291 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 CHRNB4P30926 498 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 XCR1P46094 333 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 SLC26A5P58743 744 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 COPS2P61201 443 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 LTBQ06643 244 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 PRDX1Q06830 199 aaKnown RBP11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 PMPCAQ10713 525 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 USP10Q14694 798 aaKnown RBP11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 ICE2Q659A1 982 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 C11orf63Q6NUN7 778 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 CAVIN1Q6NZI2 390 aaKnown RBP11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 PRUNE1Q86TP1 453 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 PRIMA1Q86XR5 153 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 LIX1LQ8IVB5 337 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 LRRC56Q8IYG6 542 aaPredicted RBP11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 OR52N2Q8NGI0 321 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 OR9A1PQ8NGU1 263 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 ELP5Q8TE02 316 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 METTL21AQ8WXB1 218 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 SMPDL3AQ92484 453 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 FAM136AQ96C01 138 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 BIRC8Q96P09 236 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 DNAJB12Q9NXW2 375 aaKnown RBP11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 RIMKLBQ9ULI2 386 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 SH2B3Q9UQQ2 575 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 PLEKHA6Q9Y2H5 1048 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 PCDHA3Q9Y5H8 950 aa11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.16□□□□□ -0.62
SPTLC1P3-201ENST00000403408 KIAA1324LA8MWY0 1029 aaPredicted RBP11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 FOXO6A8MYZ6 492 aa11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 MYO1CO00159 1063 aa11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 NIPSNAP2O75323 286 aa11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 VPS26AO75436 327 aa11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 CDC123O75794 336 aaPredicted RBP11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 NSA2O95478 260 aaKnown RBP11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 MLYCDO95822 493 aa11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 TFEBP19484 476 aa11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 BCL6P41182 706 aa11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 MEOX1P50221 254 aa11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 ITGA8P53708 1063 aa11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 FOLH1Q04609 750 aa11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 KCNJ11Q14654 390 aa11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 FASTKD1Q53R41 847 aaKnown RBP11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 ACSBG2Q5FVE4 666 aa11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 MFSD4BQ5TF39 518 aa11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 TTC23LQ6PF05 361 aa11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 RPS19BP1Q86WX3 136 aaKnown RBP11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 SULF2Q8IWU5 870 aa11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 PLPP5Q8NEB5 264 aa11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 OR5T3Q8NGG3 340 aa11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 ZNF480Q8WV37 535 aa11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 SKA2Q8WVK7 121 aaPredicted RBP11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 ASB5Q8WWX0 329 aa11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 NINJ1Q92982 152 aa11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 PPP1R2P1Q96PQ5 205 aa11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 ALS2CR12Q96Q35 445 aa11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 SLC30A3Q99726 388 aa11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 KCNJ16Q9NPI9 418 aa11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 TCAF1Q9Y4C2 921 aa11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 GTF3C3Q9Y5Q9 886 aa11.15□□□□□ -0.62
SPTLC1P3-201ENST00000403408 PINLYPA6NC86 204 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ZNF860A6NHJ4 632 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 E7ENX8 843 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 H0YIG0 161 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 H7BY64 318 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 NDC80O14777 642 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 CDC40O60508 579 aaKnown RBP eCLIP11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 PHF2O75151 1096 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 RDH16O75452 317 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 PDE9AO76083 593 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 SUN1O94901 812 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 B3GALT4O96024 378 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 F7P08709 466 aaPredicted RBP11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 PYGBP11216 843 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms