RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 FCRL1Q96LA6 429 aa19.18■□□□□ 0.66
CCDC47-202ENST00000403162 KLHL25Q9H0H3 589 aa19.18■□□□□ 0.66
CCDC47-202ENST00000403162 DCSTAMPQ9H295 470 aa19.18■□□□□ 0.66
CCDC47-202ENST00000403162 RASSF1Q9NS23 344 aa19.18■□□□□ 0.66
CCDC47-202ENST00000403162 THUMPD1Q9NXG2 353 aaKnown RBP19.18■□□□□ 0.66
CCDC47-202ENST00000403162 VPS51Q9UID3 782 aa19.18■□□□□ 0.66
CCDC47-202ENST00000403162 OR51B4Q9Y5P0 310 aa19.18■□□□□ 0.66
CCDC47-202ENST00000403162 TAF4O00268 1085 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 FPGTO14772 594 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 EPN2O95208 641 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 IRF1P10914 325 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 PRPS1L1P21108 318 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 NEK2P51955 445 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 PDE12Q6L8Q7 609 aaKnown RBP19.17■□□□□ 0.66
CCDC47-202ENST00000403162 ENTHD1Q8IYW4 607 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 ADGRG2Q8IZP9 1017 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 TCAIMQ8N3R3 496 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 CSGALNACT1Q8TDX6 532 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 WBP2Q969T9 261 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 HRASLS5Q96KN8 279 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 MYOCQ99972 504 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 GABARAPL3Q9BY60 117 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 SIRT5Q9NXA8 310 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 UGT2A1Q9Y4X1 527 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 LAMA3Q16787 3333 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 SAGE2PA6NJ88 616 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 TTC36A6NLP5 189 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 CLDN7O95471 211 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 C9P02748 559 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 SERPINB1P30740 379 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 TGFBR1P36897 503 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 SPAM1P38567 509 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 RGS19P49795 217 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 SRSF11Q05519 484 aaKnown RBP19.17■□□□□ 0.66
CCDC47-202ENST00000403162 CAMK2GQ13555 558 aaPredicted RBP19.17■□□□□ 0.66
CCDC47-202ENST00000403162 MAPK11Q15759 364 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 ZNF181Q2M3W8 571 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 ZNF404Q494X3 552 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 IQCCQ4KMZ1 466 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 NEK5Q6P3R8 708 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 CCDC149Q6ZUS6 474 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 LYSMD2Q8IV50 215 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 CBARPQ8N350 705 aaPredicted RBP19.17■□□□□ 0.66
CCDC47-202ENST00000403162 PSMA8Q8TAA3 256 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 PANX1Q96RD7 426 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 EPYCQ99645 322 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 REXO4Q9GZR2 422 aaKnown RBP19.17■□□□□ 0.66
CCDC47-202ENST00000403162 POLE4Q9NR33 117 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 ZNF229Q9UJW7 825 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 A3GALT2U3KPV4 340 aa19.17■□□□□ 0.66
CCDC47-202ENST00000403162 METTL15A6NJ78 407 aa19.16■□□□□ 0.66
CCDC47-202ENST00000403162 AGAP14A8MT82 685 aa19.16■□□□□ 0.66
CCDC47-202ENST00000403162 EIF3FO00303 357 aaPredicted RBP19.16■□□□□ 0.66
CCDC47-202ENST00000403162 PRMT3O60678 531 aa19.16■□□□□ 0.66
CCDC47-202ENST00000403162 C1QCP02747 245 aa19.16■□□□□ 0.66
CCDC47-202ENST00000403162 C8AP07357 584 aa19.16■□□□□ 0.66
CCDC47-202ENST00000403162 VEZF1Q14119 521 aa19.16■□□□□ 0.66
CCDC47-202ENST00000403162 NOXRED1Q6NXP6 359 aa19.16■□□□□ 0.66
CCDC47-202ENST00000403162 GALNT10Q86SR1 603 aa19.16■□□□□ 0.66
CCDC47-202ENST00000403162 DNASE1L2Q92874 299 aa19.16■□□□□ 0.66
CCDC47-202ENST00000403162 UBE2FQ969M7 185 aa19.16■□□□□ 0.66
CCDC47-202ENST00000403162 TIFAQ96CG3 184 aa19.16■□□□□ 0.66
CCDC47-202ENST00000403162 APOLD1Q96LR9 279 aa19.16■□□□□ 0.66
CCDC47-202ENST00000403162 KLF16Q9BXK1 252 aaPredicted RBP19.16■□□□□ 0.66
CCDC47-202ENST00000403162 STOML2Q9UJZ1 356 aa19.16■□□□□ 0.66
CCDC47-202ENST00000403162 PNMA8BQ9ULN7 279 aaPredicted RBP19.16■□□□□ 0.66
CCDC47-202ENST00000403162 PCDHGA6Q9Y5G7 932 aa19.16■□□□□ 0.66
CCDC47-202ENST00000403162 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.16■□□□□ 0.66
CCDC47-202ENST00000403162 EPOPA6NHQ4 379 aa19.16■□□□□ 0.66
CCDC47-202ENST00000403162 TBL1XO60907 577 aa19.16■□□□□ 0.66
CCDC47-202ENST00000403162 SCN2BO60939 215 aa19.16■□□□□ 0.66
CCDC47-202ENST00000403162 MYO1DO94832 1006 aa19.16■□□□□ 0.66
CCDC47-202ENST00000403162 EIF2S1P05198 315 aaKnown RBP19.16■□□□□ 0.66
CCDC47-202ENST00000403162 PABPC1P11940 636 aaKnown RBP19.16■□□□□ 0.66
CCDC47-202ENST00000403162 BMP1P13497 986 aa19.16■□□□□ 0.66
CCDC47-202ENST00000403162 HMGA1P17096 107 aaKnown RBP19.16■□□□□ 0.66
CCDC47-202ENST00000403162 HNF1BP35680 557 aa19.16■□□□□ 0.66
CCDC47-202ENST00000403162 LIPAP38571 399 aa19.16■□□□□ 0.66
CCDC47-202ENST00000403162 NSG1P42857 185 aa19.16■□□□□ 0.66
CCDC47-202ENST00000403162 CLK1P49759 484 aaKnown RBP19.16■□□□□ 0.66
CCDC47-202ENST00000403162 SELENBP1Q13228 472 aa19.16■□□□□ 0.66
CCDC47-202ENST00000403162 PLD1Q13393 1074 aa19.16■□□□□ 0.66
CCDC47-202ENST00000403162 TBCEQ15813 527 aaPredicted RBP19.16■□□□□ 0.66
CCDC47-202ENST00000403162 ZXDCQ2QGD7 858 aaPredicted RBP19.16■□□□□ 0.66
CCDC47-202ENST00000403162 CCDC92Q53HC0 331 aaPredicted RBP19.16■□□□□ 0.66
CCDC47-202ENST00000403162 TM6SF2Q9BZW4 377 aa19.16■□□□□ 0.66
CCDC47-202ENST00000403162 PLCXD1Q9NUJ7 323 aa19.16■□□□□ 0.66
CCDC47-202ENST00000403162 PABPN1LA6NDY0 278 aaKnown RBP19.15■□□□□ 0.66
CCDC47-202ENST00000403162 MAGEB17A8MXT2 336 aa19.15■□□□□ 0.66
CCDC47-202ENST00000403162 SCAMP3O14828 347 aaKnown RBP19.15■□□□□ 0.66
CCDC47-202ENST00000403162 LRG1P02750 347 aa19.15■□□□□ 0.66
CCDC47-202ENST00000403162 SLC6A12P48065 614 aa19.15■□□□□ 0.66
CCDC47-202ENST00000403162 WNT3P56703 355 aa19.15■□□□□ 0.66
CCDC47-202ENST00000403162 BCL2L1Q07817 233 aa19.15■□□□□ 0.66
CCDC47-202ENST00000403162 ELP6Q0PNE2 266 aa19.15■□□□□ 0.66
CCDC47-202ENST00000403162 UGT8Q16880 541 aa19.15■□□□□ 0.66
CCDC47-202ENST00000403162 MLIPQ5VWP3 458 aa19.15■□□□□ 0.66
CCDC47-202ENST00000403162 DNAJB7Q7Z6W7 309 aaPredicted RBP19.15■□□□□ 0.66
CCDC47-202ENST00000403162 SLC22A15Q8IZD6 547 aa19.15■□□□□ 0.66
CCDC47-202ENST00000403162 DCAF4L2Q8NA75 395 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms