RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 MACROD1Q9BQ69 325 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 SELENOSQ9BQE4 189 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 CAPS2Q9BXY5 557 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 IQCGQ9H095 443 aaKnown RBP11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 STMN4Q9H169 189 aaPredicted RBP11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 MLXIPLQ9NP71 852 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 TNFRSF12AQ9NP84 129 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 SEMA4BQ9NPR2 832 aaPredicted RBP11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 STARD5Q9NSY2 213 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 MID2Q9UJV3 735 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 RARRES3Q9UL19 164 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 PCDHGA7Q9Y5G6 932 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 FREM2Q5SZK8 3169 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ASPMQ8IZT6 3477 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 TEX51A0A1B0GUA7 166 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 TM9SF1O15321 606 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 NVLO15381 856 aaKnown RBP11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 SUPT7LO94864 414 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 DLGAP3O95886 979 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 SLC5A2P31639 672 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ITGA1P56199 1179 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 VSX2P58304 361 aaPredicted RBP11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ERVPABLB-1P60509 514 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 RPS15AP62244 130 aaKnown RBP11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 CLCQ05315 142 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 HYAL2Q12891 473 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 HKDC1Q2TB90 917 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 DCAF12Q5T6F0 453 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 GRHL2Q6ISB3 625 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 LETMD1Q6P1Q0 360 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ZCCHC23Q6ZST2 131 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 FRMD7Q6ZUT3 714 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 TIPARPQ7Z3E1 657 aaKnown RBP11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 SYVN1Q86TM6 617 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ZNF655Q8N720 491 aaPredicted RBP11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ANKRD42Q8N9B4 389 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 L3MBTL4Q8NA19 623 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 TRPC4APQ8TEL6 797 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 CREB3L4Q8TEY5 395 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 CCDC126Q96EE4 140 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 C10orf90Q96M02 699 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 AIF1LQ9BQI0 150 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 EFCAB11Q9BUY7 163 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 NTMT1Q9BV86 223 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 B3GNT4Q9C0J1 378 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 NT5DC2Q9H857 520 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 KCNK9Q9NPC2 374 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ACSL6Q9UKU0 697 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 MRPS2Q9Y399 296 aaKnown RBP11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 RNF11Q9Y3C5 154 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ANGPTL3Q9Y5C1 460 aa11.85□□□□□ -0.51
HLA-DQB1-203ENST00000399082 C4orf51C9J302 202 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ZSCAN9O15535 394 aaPredicted RBP11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 TLX3O43711 291 aaPredicted RBP11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 OR1F1O43749 312 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 SRPX2O60687 465 aaPredicted RBP11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 TRIM13O60858 407 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 KATNA1O75449 491 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 OR2B3O76000 313 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 KIAA0754O94854 1291 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ZWINTO95229 277 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ITGAXP20702 1163 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 RORAP35398 523 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 PIK3CGP48736 1102 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 SLC18A1P54219 525 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 CYP4F2P78329 520 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 TBC1D25Q3MII6 688 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 WASHC2DQ5SRD0 308 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ZNF385CQ66K41 422 aaPredicted RBP11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 TMIGD1Q6UXZ0 262 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 CEACAM20Q6UY09 585 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 BPHLQ86WA6 291 aaPredicted RBP11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ZFAND4Q86XD8 727 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 LAS2Q8IYD9 372 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 LSMEM2Q8N112 164 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 RNF175Q8N4F7 328 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 CSNK1A1LQ8N752 337 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 CCNYL1Q8N7R7 359 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 OR4F6Q8NGB9 312 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 OR8K5Q8NH50 307 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 MDM1Q8TC05 714 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 AGAP11Q8TF27 550 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 THAP11Q96EK4 314 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ZNF382Q96SR6 550 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ACTR8Q9H981 624 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 AKIRIN1Q9H9L7 192 aaPredicted RBP11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 FANCEQ9HB96 536 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ZFP69BQ9UJL9 534 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 RUVBL1Q9Y265 456 aaKnown RBP11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 TMEM184BQ9Y519 407 aaPredicted RBP11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 PCDHB3Q9Y5E6 796 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 AK5Q9Y6K8 562 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 AP1M2Q9Y6Q5 423 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 AHCTF1Q8WYP5 2266 aa11.84□□□□□ -0.51
HLA-DQB1-203ENST00000399082 WDR91A4D1P6 747 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 C1QTNF9BB2RNN3 333 aa11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 HMGB1P1B2RPK0 211 aaPredicted RBP11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.83□□□□□ -0.52
HLA-DQB1-203ENST00000399082 H3BQF6 201 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms