RNA–Protein interactions for RNA: ENST00000398842.7

CDH23-206, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 1,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-206ENST00000398842 PLIN5Q00G26 463 aa22.27■■□□□ 1.16
CDH23-206ENST00000398842 EIF2B5Q13144 721 aaKnown RBP22.27■■□□□ 1.16
CDH23-206ENST00000398842 UGT8Q16880 541 aa22.27■■□□□ 1.16
CDH23-206ENST00000398842 DPY19L1Q2PZI1 675 aa22.27■■□□□ 1.16
CDH23-206ENST00000398842 LRRC74BQ6ZQY2 392 aa22.27■■□□□ 1.16
CDH23-206ENST00000398842 MSANTD1Q6ZTZ1 278 aa22.27■■□□□ 1.16
CDH23-206ENST00000398842 PHACTR4Q8IZ21 702 aa22.27■■□□□ 1.16
CDH23-206ENST00000398842 METTL4Q8N3J2 472 aa22.27■■□□□ 1.16
CDH23-206ENST00000398842 ANKRD53Q8N9V6 530 aa22.27■■□□□ 1.16
CDH23-206ENST00000398842 CAAP1Q9H8G2 361 aa22.27■■□□□ 1.16
CDH23-206ENST00000398842 SERHLQ9NQF3 203 aa22.27■■□□□ 1.16
CDH23-206ENST00000398842 VAPAQ9P0L0 249 aa22.27■■□□□ 1.16
CDH23-206ENST00000398842 SLCO1B1Q9Y6L6 691 aa22.27■■□□□ 1.16
CDH23-206ENST00000398842 PCDH7O60245 1069 aa22.26■■□□□ 1.15
CDH23-206ENST00000398842 DNAJA2O60884 412 aa22.26■■□□□ 1.15
CDH23-206ENST00000398842 BAG2O95816 211 aa22.26■■□□□ 1.15
CDH23-206ENST00000398842 TBX6O95947 436 aaPredicted RBP22.26■■□□□ 1.15
CDH23-206ENST00000398842 THEGLP0DJG4 465 aa22.26■■□□□ 1.15
CDH23-206ENST00000398842 PTX3P26022 381 aaPredicted RBP22.26■■□□□ 1.15
CDH23-206ENST00000398842 PEBP1P30086 187 aaKnown RBP22.26■■□□□ 1.15
CDH23-206ENST00000398842 SLC19A1P41440 591 aa22.26■■□□□ 1.15
CDH23-206ENST00000398842 ASMTP46597 345 aa22.26■■□□□ 1.15
CDH23-206ENST00000398842 GSK3BP49841 420 aa22.26■■□□□ 1.15
CDH23-206ENST00000398842 CSNK1G2P78368 415 aa22.26■■□□□ 1.15
CDH23-206ENST00000398842 MRPS22P82650 360 aaKnown RBP22.26■■□□□ 1.15
CDH23-206ENST00000398842 LIPEQ05469 1076 aa22.26■■□□□ 1.15
CDH23-206ENST00000398842 BNIP2Q12982 314 aa22.26■■□□□ 1.15
CDH23-206ENST00000398842 FZD2Q14332 565 aa22.26■■□□□ 1.15
CDH23-206ENST00000398842 PGS1Q32NB8 556 aa22.26■■□□□ 1.15
CDH23-206ENST00000398842 ZFP1Q6P2D0 407 aa22.26■■□□□ 1.15
CDH23-206ENST00000398842 COMMD6Q7Z4G1 85 aa22.26■■□□□ 1.15
CDH23-206ENST00000398842 OR8J3Q8NGG0 315 aa22.26■■□□□ 1.15
CDH23-206ENST00000398842 DNAJB8Q8NHS0 232 aa22.26■■□□□ 1.15
CDH23-206ENST00000398842 GPBAR1Q8TDU6 330 aa22.26■■□□□ 1.15
CDH23-206ENST00000398842 ALG2Q9H553 416 aa22.26■■□□□ 1.15
CDH23-206ENST00000398842 TBC1D17Q9HA65 648 aa22.26■■□□□ 1.15
CDH23-206ENST00000398842 TRBV5-3A0A0A0MS03 114 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 AKAP10O43572 662 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 DFNA5O60443 496 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 C8BP07358 591 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 SRSF11Q05519 484 aaKnown RBP22.25■■□□□ 1.15
CDH23-206ENST00000398842 ILF3Q12906 894 aaKnown RBP eCLIP22.25■■□□□ 1.15
CDH23-206ENST00000398842 SELPLGQ14242 412 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 MSRB3Q8IXL7 192 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 SPEM1Q8N4L4 309 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 SNX19Q92543 992 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 CLDN23Q96B33 292 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 ANKRD27Q96NW4 1050 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 PAIP1Q9H074 479 aaKnown RBP22.25■■□□□ 1.15
CDH23-206ENST00000398842 KCNH6Q9H252 994 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 TCEAL2Q9H3H9 227 aaPredicted RBP22.25■■□□□ 1.15
CDH23-206ENST00000398842 SLC25A37Q9NYZ2 338 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 ANKDD1BA6NHY2 528 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 SERPINB1P30740 379 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 SHMT2P34897 504 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 PXNP49023 591 aaPredicted RBP22.25■■□□□ 1.15
CDH23-206ENST00000398842 LRIF1Q5T3J3 769 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 GPR180Q86V85 440 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 SPATA24Q86W54 205 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 DHFR2Q86XF0 187 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 GJD3Q8N144 294 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 OR7A2PQ8NGA2 310 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 WDR48Q8TAF3 677 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.25■■□□□ 1.15
CDH23-206ENST00000398842 FAM174AQ8TBP5 190 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 STARD8Q92502 1023 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 ZUFSPQ96AP4 578 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 CXorf40BQ96DE9 158 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 SLC6A18Q96N87 628 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 TACO1Q9BSH4 297 aaKnown RBP22.25■■□□□ 1.15
CDH23-206ENST00000398842 RMND5AQ9H871 391 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 SPHK1Q9NYA1 384 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 KLF15Q9UIH9 416 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 MAPRE3Q9UPY8 281 aa22.25■■□□□ 1.15
CDH23-206ENST00000398842 ARHGEF17Q96PE2 2063 aaPredicted RBP22.25■■□□□ 1.15
CDH23-206ENST00000398842 A0A096LPI6 279 aa22.24■■□□□ 1.15
CDH23-206ENST00000398842 FEZF1A0PJY2 475 aa22.24■■□□□ 1.15
CDH23-206ENST00000398842 SAP18O00422 153 aaKnown RBP22.24■■□□□ 1.15
CDH23-206ENST00000398842 ERN1O75460 977 aaKnown RBP22.24■■□□□ 1.15
CDH23-206ENST00000398842 KLHL18O94889 574 aa22.24■■□□□ 1.15
CDH23-206ENST00000398842 HOXB9P17482 250 aaPredicted RBP22.24■■□□□ 1.15
CDH23-206ENST00000398842 VHLP40337 213 aa22.24■■□□□ 1.15
CDH23-206ENST00000398842 KIR3DL1P43629 444 aa22.24■■□□□ 1.15
CDH23-206ENST00000398842 HNRNPFP52597 415 aaKnown RBP22.24■■□□□ 1.15
CDH23-206ENST00000398842 ABATP80404 500 aa22.24■■□□□ 1.15
CDH23-206ENST00000398842 OR4F3Q6IEY1 312 aa22.24■■□□□ 1.15
CDH23-206ENST00000398842 AMIGO1Q86WK6 493 aa22.24■■□□□ 1.15
CDH23-206ENST00000398842 PTRH1Q86Y79 214 aaKnown RBP22.24■■□□□ 1.15
CDH23-206ENST00000398842 OR8J2Q8NGG1 315 aa22.24■■□□□ 1.15
CDH23-206ENST00000398842 JPH3Q8WXH2 748 aaPredicted RBP22.24■■□□□ 1.15
CDH23-206ENST00000398842 ITCHQ96J02 903 aa22.24■■□□□ 1.15
CDH23-206ENST00000398842 MS4A8Q9BY19 250 aa22.24■■□□□ 1.15
CDH23-206ENST00000398842 SLC6A20Q9NP91 592 aa22.24■■□□□ 1.15
CDH23-206ENST00000398842 OR6C2Q9NZP2 312 aa22.24■■□□□ 1.15
CDH23-206ENST00000398842 TCRBV3S1A0A5B6 114 aa22.23■■□□□ 1.15
CDH23-206ENST00000398842 METTL12A8MUP2 240 aa22.23■■□□□ 1.15
CDH23-206ENST00000398842 SCAMP2O15127 329 aaKnown RBP22.23■■□□□ 1.15
CDH23-206ENST00000398842 SCN2BO60939 215 aa22.23■■□□□ 1.15
CDH23-206ENST00000398842 ATP6V1B2P21281 511 aa22.23■■□□□ 1.15
CDH23-206ENST00000398842 WNT3P56703 355 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms