RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 ISL1P61371 349 aa17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 SRSF11Q05519 484 aaKnown RBP17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 CSTF3Q12996 717 aaKnown RBP17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ZNF77Q15935 545 aa17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 RGS21Q2M5E4 152 aa17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 VMACQ2NL98 169 aa17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 CYP4Z1Q86W10 505 aa17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 C1orf52Q8N6N3 182 aaKnown RBP17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 GPR156Q8NFN8 814 aa17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 PKP4Q99569 1192 aa17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 DKK3Q9UBP4 350 aa17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 AASSQ9UDR5 926 aa17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 CDH7Q9ULB5 785 aa17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 PLXNA2O75051 1894 aa17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ELFN1P0C7U0 828 aa17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 PTPN2P17706 415 aa17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 MAGEA2P43356 314 aa17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 TRPC1P48995 793 aa17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 TSTA3Q13630 321 aaPredicted RBP17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 SF3B4Q15427 424 aaKnown RBP eCLIP17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ZNF805Q5CZA5 627 aa17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 TMEM220Q6QAJ8 160 aa17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 TECPR1Q7Z6L1 1165 aa17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ZZZ3Q8IYH5 903 aa17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 TBC1D15Q8TC07 691 aa17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 CRISPLD2Q9H0B8 497 aa17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 VPS4AQ9UN37 437 aa17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 SERTM1A2A2V5 107 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 UGDHO60701 494 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 ATG13O75143 517 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 SULT1C4O75897 302 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 NUDT7P0C024 238 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 ZNF182P17025 639 aaPredicted RBP17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 IL1RNP18510 177 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 KCNC4Q03721 635 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 KCNC3Q14003 757 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 DMC1Q14565 340 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 NR1D2Q14995 579 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 SKIV2LQ15477 1246 aaKnown RBP17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 HKDC1Q2TB90 917 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 ARHGAP15Q53QZ3 475 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 LIPIQ6XZB0 460 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 PTOV1Q86YD1 416 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 HIPK1Q86Z02 1210 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 CNIH3Q8TBE1 160 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 PAWRQ96IZ0 340 aaKnown RBP17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 CCDC138Q96M89 665 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 SAMD11Q96NU1 681 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 TUBA1CQ9BQE3 449 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 RUVBL1Q9Y265 456 aaKnown RBP17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 CARNS1A5YM72 827 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 SEC14L2O76054 403 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 CATP04040 527 aaKnown RBP17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 ACPPP15309 386 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 RAE1P78406 368 aaKnown RBP17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 VLDLRP98155 873 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 RAPSNQ13702 412 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 SIM2Q14190 667 aaPredicted RBP17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 DPY19L1Q2PZI1 675 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 FAM209AQ5JX71 171 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 OR8J2Q8NGG1 315 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 TIFAQ96CG3 184 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 MYOCQ99972 504 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 DGCR6LQ9BY27 220 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 IL1RAPQ9NPH3 570 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 CARD8Q9Y2G2 431 aa17.7■□□□□ 0.42
CHRFAM7A-202ENST00000397827 SLC5A10A0PJK1 596 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 KRBA1A5PL33 1030 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 GABRR3A8MPY1 467 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 KPNA3O00505 521 aaPredicted RBP17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 NPC1O15118 1278 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 FKBP9O95302 570 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 GPX2P18283 190 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 IGFBP5P24593 272 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 KDELR2P33947 212 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 EPHA5P54756 1037 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 BNIP3Q12983 259 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 ITGADQ13349 1161 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 ZNF691Q5VV52 312 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 GRHL2Q6ISB3 625 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 MSANTD1Q6ZTZ1 278 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 FKBP9P1Q75LS8 142 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 OR7G3Q8NG95 312 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 HUS1BQ8NHY5 278 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 NEIL2Q969S2 332 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 TAMM41Q96BW9 452 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 C11orf24Q96F05 449 aaPredicted RBP17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 DUSP26Q9BV47 211 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 PAK1IP1Q9NWT1 392 aaPredicted RBP17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 GULP1Q9UBP9 304 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 ORC6Q9Y5N6 252 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 UNC80Q8N2C7 3258 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 H0YIV9 168 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 XPNPEP2O43895 674 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 NTRK1P04629 796 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 ANXA4P09525 319 aaPredicted RBP17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 JUNBP17275 347 aaPredicted RBP17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 PRLHRP49683 370 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 BMXP51813 675 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 RAD23AP54725 363 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms