RNA–Protein interactions for RNA: ENST00000397677.5

CHMP7-202, Transcript of charged multivesicular body protein 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP7, Length 3,403 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-202ENST00000397677 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.36□□□□□ -0.27
CHMP7-202ENST00000397677 GABARAPL1Q9H0R8 117 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 FAM240BA0A1B0GVZ2 78 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 WASHC1A8K0Z3 465 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 TSPAN12O95859 305 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 PEX11BO96011 259 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 PRLP01236 227 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 ENGP17813 658 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 FEN1P39748 380 aaKnown RBP13.36□□□□□ -0.27
CHMP7-202ENST00000397677 CDH12P55289 794 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 PSPHP78330 225 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 SUZ12Q15022 739 aaKnown RBP13.36□□□□□ -0.27
CHMP7-202ENST00000397677 C5orf22Q49AR2 442 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 FBXO43Q4G163 708 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 SLC35F1Q5T1Q4 408 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 LIPKQ5VXJ0 399 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 MBOAT1Q6ZNC8 495 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 ATCAYQ86WG3 371 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 NKAPQ8N5F7 415 aaKnown RBP13.36□□□□□ -0.27
CHMP7-202ENST00000397677 RTL3Q8N8U3 475 aaKnown RBP13.36□□□□□ -0.27
CHMP7-202ENST00000397677 C1QTNF6Q9BXI9 259 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 EBPLQ9BY08 206 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 C12orf10Q9HB07 376 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 ZC4H2Q9NQZ6 224 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 COMMD3Q9UBI1 195 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 TRAPPC4Q9Y296 219 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 CFAP20Q9Y6A4 193 aaKnown RBP13.36□□□□□ -0.27
CHMP7-202ENST00000397677 GRXCR2A6NFK2 248 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 PLOD3O60568 738 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 ALAS2P22557 587 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 GZMMP51124 257 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 OLR1P78380 273 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 WSCD2Q2TBF2 565 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 UAP1L1Q3KQV9 507 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 PUS10Q3MIT2 529 aaKnown RBP13.36□□□□□ -0.27
CHMP7-202ENST00000397677 NOTUMQ6P988 496 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 ZNF767PQ75MW2 155 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 BCDIN3DQ7Z5W3 292 aaKnown RBP13.36□□□□□ -0.27
CHMP7-202ENST00000397677 GPR65Q8IYL9 337 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 RNF175Q8N4F7 328 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 OR9Q1Q8NGQ5 310 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 MAGEB10Q96LZ2 347 aaPredicted RBP13.36□□□□□ -0.27
CHMP7-202ENST00000397677 PANX1Q96RD7 426 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 ATP13A1Q9HD20 1204 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 NDRG2Q9UN36 371 aaKnown RBP13.36□□□□□ -0.27
CHMP7-202ENST00000397677 KLK4Q9Y5K2 254 aa13.36□□□□□ -0.27
CHMP7-202ENST00000397677 PARP14Q460N5 1801 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 TNFRSF11BO00300 401 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 IFRD1O00458 451 aaPredicted RBP13.35□□□□□ -0.27
CHMP7-202ENST00000397677 WARSP23381 471 aaKnown RBP13.35□□□□□ -0.27
CHMP7-202ENST00000397677 CCT3P49368 545 aaKnown RBP13.35□□□□□ -0.27
CHMP7-202ENST00000397677 MRPL19P49406 292 aaKnown RBP13.35□□□□□ -0.27
CHMP7-202ENST00000397677 ABHD18Q0P651 414 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 TIMM50Q3ZCQ8 353 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 PIK3R6Q5UE93 754 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 MSANTD2Q6P1R3 559 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 PAQR6Q6TCH4 344 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 CALHM3Q86XJ0 350 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 DENND1CQ8IV53 801 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 RDH10Q8IZV5 341 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 C19orf18Q8NEA5 215 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 REPS1Q96D71 796 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 CLMPQ9H6B4 373 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 SERHLQ9NQF3 203 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 NYNRINQ9P2P1 1898 aaKnown RBP13.35□□□□□ -0.27
CHMP7-202ENST00000397677 H3BRB1 525 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 CLIC1O00299 241 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 IRAK2O43187 625 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 PKMP14618 531 aaKnown RBP13.35□□□□□ -0.27
CHMP7-202ENST00000397677 ZNF33AQ06730 810 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.35□□□□□ -0.27
CHMP7-202ENST00000397677 ZNF284Q2VY69 593 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 SDHAF4Q5VUM1 108 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 KCTD20Q7Z5Y7 419 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 LPCAT1Q8NF37 534 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 OR10G2Q8NGC3 310 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 ARRDC2Q8TBH0 407 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 MYLPFQ96A32 169 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 SH3KBP1Q96B97 665 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 PITX2Q99697 317 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 AIFM2Q9BRQ8 373 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 SPATA9Q9BWV2 254 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 TNPO3Q9Y5L0 923 aaKnown RBP13.35□□□□□ -0.27
CHMP7-202ENST00000397677 ACVRL1P37023 503 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 BNC1Q01954 994 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 SF1Q15637 639 aaKnown RBP13.35□□□□□ -0.27
CHMP7-202ENST00000397677 TRIM71Q2Q1W2 868 aaKnown RBP13.35□□□□□ -0.27
CHMP7-202ENST00000397677 UBE2Q1Q7Z7E8 422 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 SLC37A3Q8NCC5 494 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 TTC9Q92623 222 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 RIT1Q92963 219 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 FKBPLQ9UIM3 349 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 DERAQ9Y315 318 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 GJA3Q9Y6H8 435 aa13.35□□□□□ -0.27
CHMP7-202ENST00000397677 LOC730098B7Z3J9 87 aa13.34□□□□□ -0.27
CHMP7-202ENST00000397677 OTCP00480 354 aa13.34□□□□□ -0.27
CHMP7-202ENST00000397677 C1QBP02746 253 aa13.34□□□□□ -0.27
CHMP7-202ENST00000397677 ALPPP05187 535 aa13.34□□□□□ -0.27
CHMP7-202ENST00000397677 TRAPPC2P0DI81 140 aa13.34□□□□□ -0.27
CHMP7-202ENST00000397677 TRAPPC2BP0DI82 140 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms