RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 ALDOCP09972 364 aaKnown RBP20.31■□□□□ 0.84
CPNE1-204ENST00000397443 EPHA4P54764 986 aa20.31■□□□□ 0.84
CPNE1-204ENST00000397443 NME5P56597 212 aa20.31■□□□□ 0.84
CPNE1-204ENST00000397443 DAB2P98082 770 aa20.31■□□□□ 0.84
CPNE1-204ENST00000397443 FCRL6Q6DN72 434 aa20.31■□□□□ 0.84
CPNE1-204ENST00000397443 ZNF425Q6IV72 752 aa20.31■□□□□ 0.84
CPNE1-204ENST00000397443 PAQR7Q86WK9 346 aa20.31■□□□□ 0.84
CPNE1-204ENST00000397443 MAP3K3Q99759 626 aa20.31■□□□□ 0.84
CPNE1-204ENST00000397443 OR51B5Q9H339 312 aa20.31■□□□□ 0.84
CPNE1-204ENST00000397443 SYNDIG1Q9H7V2 258 aa20.31■□□□□ 0.84
CPNE1-204ENST00000397443 LRTM1Q9HBL6 345 aa20.31■□□□□ 0.84
CPNE1-204ENST00000397443 DMRT3Q9NQL9 472 aa20.31■□□□□ 0.84
CPNE1-204ENST00000397443 SAR1AQ9NR31 198 aa20.31■□□□□ 0.84
CPNE1-204ENST00000397443 ASCC3Q8N3C0 2202 aaKnown RBP20.3■□□□□ 0.84
CPNE1-204ENST00000397443 CCDC22O60826 627 aa20.3■□□□□ 0.84
CPNE1-204ENST00000397443 ZNF806P0C7X5 589 aa20.3■□□□□ 0.84
CPNE1-204ENST00000397443 ST6GAL1P15907 406 aa20.3■□□□□ 0.84
CPNE1-204ENST00000397443 RFTN2Q52LD8 501 aaPredicted RBP20.3■□□□□ 0.84
CPNE1-204ENST00000397443 PRRX2Q99811 253 aa20.3■□□□□ 0.84
CPNE1-204ENST00000397443 MRPL1Q9BYD6 325 aaKnown RBP20.3■□□□□ 0.84
CPNE1-204ENST00000397443 SYNPO2LQ9H987 977 aa20.3■□□□□ 0.84
CPNE1-204ENST00000397443 A0A0J9YVX5 310 aa20.29■□□□□ 0.84
CPNE1-204ENST00000397443 TRBC2A0A5B9 178 aa20.29■□□□□ 0.84
CPNE1-204ENST00000397443 CCT8L1PA6NM43 557 aa20.29■□□□□ 0.84
CPNE1-204ENST00000397443 CTSVO60911 334 aa20.29■□□□□ 0.84
CPNE1-204ENST00000397443 EZRP15311 586 aaKnown RBP20.29■□□□□ 0.84
CPNE1-204ENST00000397443 HRH2P25021 359 aa20.29■□□□□ 0.84
CPNE1-204ENST00000397443 DIO3P55073 304 aa20.29■□□□□ 0.84
CPNE1-204ENST00000397443 PHEXP78562 749 aa20.29■□□□□ 0.84
CPNE1-204ENST00000397443 CSTF3Q12996 717 aaKnown RBP20.29■□□□□ 0.84
CPNE1-204ENST00000397443 SUZ12Q15022 739 aaKnown RBP20.29■□□□□ 0.84
CPNE1-204ENST00000397443 ZIC1Q15915 447 aa20.29■□□□□ 0.84
CPNE1-204ENST00000397443 ZSCAN26Q16670 478 aa20.29■□□□□ 0.84
CPNE1-204ENST00000397443 SNAP47Q5SQN1 464 aa20.29■□□□□ 0.84
CPNE1-204ENST00000397443 CLNKQ7Z7G1 428 aa20.29■□□□□ 0.84
CPNE1-204ENST00000397443 GBP7Q8N8V2 638 aaPredicted RBP20.29■□□□□ 0.84
CPNE1-204ENST00000397443 APIPQ96GX9 242 aa20.29■□□□□ 0.84
CPNE1-204ENST00000397443 SLC45A3Q96JT2 553 aa20.29■□□□□ 0.84
CPNE1-204ENST00000397443 PPP3R2Q96LZ3 170 aa20.29■□□□□ 0.84
CPNE1-204ENST00000397443 NCDNQ9UBB6 729 aa20.29■□□□□ 0.84
CPNE1-204ENST00000397443 VPS29Q9UBQ0 182 aa20.29■□□□□ 0.84
CPNE1-204ENST00000397443 POLR3HQ9Y535 204 aaPredicted RBP20.29■□□□□ 0.84
CPNE1-204ENST00000397443 COPG1Q9Y678 874 aaKnown RBP20.29■□□□□ 0.84
CPNE1-204ENST00000397443 OR2A25A4D2G3 310 aa20.29■□□□□ 0.84
CPNE1-204ENST00000397443 SLC9B1P1A6NJY1 282 aa20.29■□□□□ 0.84
CPNE1-204ENST00000397443 DUX1O43812 170 aa20.29■□□□□ 0.84
CPNE1-204ENST00000397443 RASSF9O75901 435 aa20.29■□□□□ 0.84
CPNE1-204ENST00000397443 GPR3P46089 330 aa20.29■□□□□ 0.84
CPNE1-204ENST00000397443 SCTRP47872 440 aa20.29■□□□□ 0.84
CPNE1-204ENST00000397443 SPRED1Q7Z699 444 aa20.29■□□□□ 0.84
CPNE1-204ENST00000397443 FAM181AQ8N9Y4 354 aa20.29■□□□□ 0.84
CPNE1-204ENST00000397443 C1orf109Q9NX04 203 aa20.29■□□□□ 0.84
CPNE1-204ENST00000397443 TMEM9Q9P0T7 183 aa20.29■□□□□ 0.84
CPNE1-204ENST00000397443 PRR35P0CG20 571 aa20.28■□□□□ 0.84
CPNE1-204ENST00000397443 ERVK-8P63133 956 aa20.28■□□□□ 0.84
CPNE1-204ENST00000397443 METTL21CQ5VZV1 264 aa20.28■□□□□ 0.84
CPNE1-204ENST00000397443 RIPOR1Q6ZS17 1223 aa20.28■□□□□ 0.84
CPNE1-204ENST00000397443 RNF165Q6ZSG1 346 aa20.28■□□□□ 0.84
CPNE1-204ENST00000397443 TBC1D19Q8N5T2 526 aa20.28■□□□□ 0.84
CPNE1-204ENST00000397443 BAHD1Q8TBE0 780 aaPredicted RBP20.28■□□□□ 0.84
CPNE1-204ENST00000397443 STON2Q8WXE9 905 aa20.28■□□□□ 0.84
CPNE1-204ENST00000397443 EDEM2Q9BV94 578 aa20.28■□□□□ 0.84
CPNE1-204ENST00000397443 SEMA6CQ9H3T2 930 aa20.28■□□□□ 0.84
CPNE1-204ENST00000397443 BRF2Q9HAW0 419 aa20.28■□□□□ 0.84
CPNE1-204ENST00000397443 SEMA4GQ9NTN9 838 aa20.28■□□□□ 0.84
CPNE1-204ENST00000397443 EME2A4GXA9 379 aaPredicted RBP20.27■□□□□ 0.84
CPNE1-204ENST00000397443 CDX4O14627 284 aaPredicted RBP20.27■□□□□ 0.84
CPNE1-204ENST00000397443 TNFSF14O43557 240 aa20.27■□□□□ 0.84
CPNE1-204ENST00000397443 RSL1D1O76021 490 aaKnown RBP20.27■□□□□ 0.84
CPNE1-204ENST00000397443 CD1CP29017 333 aa20.27■□□□□ 0.84
CPNE1-204ENST00000397443 CSF2RBP32927 897 aa20.27■□□□□ 0.84
CPNE1-204ENST00000397443 PIK3CBP42338 1070 aa20.27■□□□□ 0.84
CPNE1-204ENST00000397443 CFHR1Q03591 330 aa20.27■□□□□ 0.84
CPNE1-204ENST00000397443 IL23RQ5VWK5 629 aa20.27■□□□□ 0.84
CPNE1-204ENST00000397443 FBXO42Q6P3S6 717 aa20.27■□□□□ 0.84
CPNE1-204ENST00000397443 C6orf89Q6UWU4 347 aa20.27■□□□□ 0.84
CPNE1-204ENST00000397443 ZNF771Q7L3S4 317 aaPredicted RBP20.27■□□□□ 0.84
CPNE1-204ENST00000397443 RHBDD1Q8TEB9 315 aa20.27■□□□□ 0.84
CPNE1-204ENST00000397443 ZUFSPQ96AP4 578 aa20.27■□□□□ 0.84
CPNE1-204ENST00000397443 ZDHHC12Q96GR4 267 aa20.27■□□□□ 0.84
CPNE1-204ENST00000397443 CCDC3Q9BQI4 270 aa20.27■□□□□ 0.84
CPNE1-204ENST00000397443 NUDT22Q9BRQ3 303 aa20.27■□□□□ 0.84
CPNE1-204ENST00000397443 RHBGQ9H310 441 aa20.27■□□□□ 0.84
CPNE1-204ENST00000397443 DNAAF2Q9NVR5 837 aaKnown RBP20.27■□□□□ 0.84
CPNE1-204ENST00000397443 ATXN7L1Q9ULK2 861 aaPredicted RBP20.27■□□□□ 0.84
CPNE1-204ENST00000397443 FOXE1O00358 373 aaPredicted RBP20.27■□□□□ 0.84
CPNE1-204ENST00000397443 NDUFS4O43181 175 aa20.27■□□□□ 0.84
CPNE1-204ENST00000397443 SH3BP5O60239 455 aa20.27■□□□□ 0.84
CPNE1-204ENST00000397443 CD1EP15812 388 aa20.27■□□□□ 0.84
CPNE1-204ENST00000397443 GRK6P43250 576 aa20.27■□□□□ 0.84
CPNE1-204ENST00000397443 GPLD1P80108 840 aa20.27■□□□□ 0.84
CPNE1-204ENST00000397443 DEFB110Q30KQ9 67 aa20.27■□□□□ 0.84
CPNE1-204ENST00000397443 PROX2Q3B8N5 592 aa20.27■□□□□ 0.84
CPNE1-204ENST00000397443 CHSY3Q70JA7 882 aa20.27■□□□□ 0.84
CPNE1-204ENST00000397443 IFI44Q8TCB0 444 aa20.27■□□□□ 0.84
CPNE1-204ENST00000397443 TRAPPC9Q96Q05 1148 aa20.27■□□□□ 0.84
CPNE1-204ENST00000397443 F2RL3Q96RI0 385 aa20.27■□□□□ 0.84
CPNE1-204ENST00000397443 EBPLQ9BY08 206 aa20.27■□□□□ 0.84
CPNE1-204ENST00000397443 PITHD1Q9GZP4 211 aaPredicted RBP20.27■□□□□ 0.84
CPNE1-204ENST00000397443 NT5DC2Q9H857 520 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms