RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 ZBTB18Q99592 522 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 RTKNQ9BST9 563 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 DNAAF2Q9NVR5 837 aaKnown RBP18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 CUEDC1Q9NWM3 386 aaPredicted RBP18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 SPHK1Q9NYA1 384 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 ADAM29Q9UKF5 820 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 POMT2Q9UKY4 750 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 SH2B3Q9UQQ2 575 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 AP1M2Q9Y6Q5 423 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 TDRD6O60522 2096 aaKnown RBP18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 PI4KAP42356 2102 aa18.25■□□□□ 0.51
TSPAN4-204ENST00000397404 URADA6NGE7 173 aa18.25■□□□□ 0.51
TSPAN4-204ENST00000397404 MAGEB17A8MXT2 336 aa18.25■□□□□ 0.51
TSPAN4-204ENST00000397404 SLC22A3O75751 556 aa18.25■□□□□ 0.51
TSPAN4-204ENST00000397404 COX4I1P13073 169 aa18.25■□□□□ 0.51
TSPAN4-204ENST00000397404 PSMB5P28074 263 aa18.25■□□□□ 0.51
TSPAN4-204ENST00000397404 PTPN4P29074 926 aa18.25■□□□□ 0.51
TSPAN4-204ENST00000397404 GRIA3P42263 894 aa18.25■□□□□ 0.51
TSPAN4-204ENST00000397404 NEK2P51955 445 aa18.25■□□□□ 0.51
TSPAN4-204ENST00000397404 RPL38P63173 70 aaKnown RBP18.25■□□□□ 0.51
TSPAN4-204ENST00000397404 HMGCS1Q01581 520 aa18.25■□□□□ 0.51
TSPAN4-204ENST00000397404 TGM3Q08188 693 aa18.25■□□□□ 0.51
TSPAN4-204ENST00000397404 SUZ12Q15022 739 aaKnown RBP18.25■□□□□ 0.51
TSPAN4-204ENST00000397404 RFTN2Q52LD8 501 aaPredicted RBP18.25■□□□□ 0.51
TSPAN4-204ENST00000397404 TRIM61Q5EBN2 209 aa18.25■□□□□ 0.51
TSPAN4-204ENST00000397404 SCIMPQ6UWF3 145 aa18.25■□□□□ 0.51
TSPAN4-204ENST00000397404 PAQR7Q86WK9 346 aa18.25■□□□□ 0.51
TSPAN4-204ENST00000397404 MFSD9Q8NBP5 474 aa18.25■□□□□ 0.51
TSPAN4-204ENST00000397404 FLVCR1-AS1Q8TAF5 88 aa18.25■□□□□ 0.51
TSPAN4-204ENST00000397404 C11orf24Q96F05 449 aaPredicted RBP18.25■□□□□ 0.51
TSPAN4-204ENST00000397404 ZDHHC12Q96GR4 267 aa18.25■□□□□ 0.51
TSPAN4-204ENST00000397404 MMADHCQ9H3L0 296 aaPredicted RBP18.25■□□□□ 0.51
TSPAN4-204ENST00000397404 C1GALT1Q9NS00 363 aa18.25■□□□□ 0.51
TSPAN4-204ENST00000397404 IGKV1-8A0A0C4DH67 115 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 PRAMEF33A0A0G2JMD5 474 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 CFAP73A6NFT4 308 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 PPM1DO15297 605 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 MAP3K7O43318 606 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 OR1F1O43749 312 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 PROS1P07225 676 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 SNRPB2P08579 225 aaKnown RBP18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 POLR2CP19387 275 aaPredicted RBP18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 GPX3P22352 226 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 RPL3P39023 403 aaKnown RBP18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 C21orf58P58505 322 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 DMTNQ08495 405 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 PWP1Q13610 501 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 SHBQ15464 509 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 CLPPQ16740 277 aaPredicted RBP18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 DNAL1Q4LDG9 190 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 DEPDC1Q5TB30 811 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 IL23RQ5VWK5 629 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 LAIR1Q6GTX8 287 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 KANSL1Q7Z3B3 1105 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 TREML1Q86YW5 311 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 ARHGAP24Q8N264 748 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 OR10G6Q8NH81 332 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 CHTF18Q8WVB6 975 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 RSC1A1Q92681 617 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 MTFMTQ96DP5 389 aaKnown RBP18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 DPYSL5Q9BPU6 564 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 IRF2BPLQ9H1B7 796 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 LRMDAQ9H2I8 198 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 SEMA6CQ9H3T2 930 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 GAREM1Q9H706 876 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 EFCAB1Q9HAE3 211 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 PRM3Q9NNZ6 103 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 SLC6A20Q9NP91 592 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 UCKL1Q9NWZ5 548 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 PCDHGB2Q9Y5G2 931 aa18.24■□□□□ 0.51
TSPAN4-204ENST00000397404 FAM234BA2RU67 622 aa18.23■□□□□ 0.51
TSPAN4-204ENST00000397404 SDC3O75056 442 aa18.23■□□□□ 0.51
TSPAN4-204ENST00000397404 NPPAP01160 153 aa18.23■□□□□ 0.51
TSPAN4-204ENST00000397404 T-ENOLP0DO92 83 aa18.23■□□□□ 0.51
TSPAN4-204ENST00000397404 MAZP56270 477 aaKnown RBP18.23■□□□□ 0.51
TSPAN4-204ENST00000397404 STXBP1P61764 594 aaKnown RBP18.23■□□□□ 0.51
TSPAN4-204ENST00000397404 RPS13P62277 151 aaKnown RBP18.23■□□□□ 0.51
TSPAN4-204ENST00000397404 DDX39BQ13838 428 aaKnown RBP18.23■□□□□ 0.51
TSPAN4-204ENST00000397404 KHDRBS2Q5VWX1 349 aaKnown RBP18.23■□□□□ 0.51
TSPAN4-204ENST00000397404 KIAA1614Q5VZ46 1190 aa18.23■□□□□ 0.51
TSPAN4-204ENST00000397404 NOXRED1Q6NXP6 359 aa18.23■□□□□ 0.51
TSPAN4-204ENST00000397404 CYP20A1Q6UW02 462 aa18.23■□□□□ 0.51
TSPAN4-204ENST00000397404 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.23■□□□□ 0.511e-6■■■■■ 92.8
TSPAN4-204ENST00000397404 METTL4Q8N3J2 472 aa18.23■□□□□ 0.51
TSPAN4-204ENST00000397404 PCYOX1LQ8NBM8 494 aa18.23■□□□□ 0.51
TSPAN4-204ENST00000397404 BAHD1Q8TBE0 780 aaPredicted RBP18.23■□□□□ 0.51
TSPAN4-204ENST00000397404 NAT6Q93015 286 aa18.23■□□□□ 0.51
TSPAN4-204ENST00000397404 HBEGFQ99075 208 aa18.23■□□□□ 0.51
TSPAN4-204ENST00000397404 MS4A8Q9BY19 250 aa18.23■□□□□ 0.51
TSPAN4-204ENST00000397404 MRPL1Q9BYD6 325 aaKnown RBP18.23■□□□□ 0.51
TSPAN4-204ENST00000397404 ABCG4Q9H172 646 aa18.23■□□□□ 0.51
TSPAN4-204ENST00000397404 ARL8BQ9NVJ2 186 aa18.23■□□□□ 0.51
TSPAN4-204ENST00000397404 LRIT1Q9P2V4 623 aa18.23■□□□□ 0.51
TSPAN4-204ENST00000397404 NDUFAF1Q9Y375 327 aa18.23■□□□□ 0.51
TSPAN4-204ENST00000397404 PCDHGA4Q9Y5G9 962 aa18.23■□□□□ 0.51
TSPAN4-204ENST00000397404 HEATR5BQ9P2D3 2071 aa18.23■□□□□ 0.51
TSPAN4-204ENST00000397404 TXNDC9O14530 226 aa18.22■□□□□ 0.51
TSPAN4-204ENST00000397404 KHNYNO15037 678 aaKnown RBP18.22■□□□□ 0.51
TSPAN4-204ENST00000397404 DUX1O43812 170 aa18.22■□□□□ 0.51
TSPAN4-204ENST00000397404 CBX6O95503 412 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms