RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 FOXA1P55317 472 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 RAB15P59190 212 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 LCP2Q13094 533 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 MRM1Q6IN84 353 aaKnown RBP10.11□□□□□ -0.79
NUP98-205ENST00000397007 DSELQ8IZU8 1212 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 CTRCQ99895 268 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 BRF2Q9HAW0 419 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 CPSF2Q9P2I0 782 aaKnown RBP10.11□□□□□ -0.79
NUP98-205ENST00000397007 ZFP69BQ9UJL9 534 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 PLCL2Q9UPR0 1127 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.11□□□□□ -0.79
NUP98-205ENST00000397007 SLC22A7Q9Y694 548 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 SUPT3HB4E1H0 165 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 SUPT3HO75486 399 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 SERPINB1P30740 379 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 PKNOX1P55347 436 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 IFFO1Q0D2I5 559 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 TIPARPQ7Z3E1 657 aaKnown RBP10.11□□□□□ -0.79
NUP98-205ENST00000397007 MAVSQ7Z434 540 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 ARMC2Q8NEN0 867 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 MAGEB10Q96LZ2 347 aaPredicted RBP10.11□□□□□ -0.79
NUP98-205ENST00000397007 TAAR9Q96RI9 348 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 EFCAB11Q9BUY7 163 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 TGIF2Q9GZN2 237 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 MED4Q9NPJ6 270 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 UTP6Q9NYH9 597 aaKnown RBP10.11□□□□□ -0.79
NUP98-205ENST00000397007 TSR3Q9UJK0 312 aaKnown RBP10.11□□□□□ -0.79
NUP98-205ENST00000397007 KLHL20Q9Y2M5 609 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 PIEZO1Q92508 2521 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 LRIT2A6NDA9 550 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 H2AFYO75367 372 aaKnown RBP10.11□□□□□ -0.79
NUP98-205ENST00000397007 HNRNPH1P31943 449 aaKnown RBP10.11□□□□□ -0.79
NUP98-205ENST00000397007 RAE1P78406 368 aaKnown RBP10.11□□□□□ -0.79
NUP98-205ENST00000397007 RCN2Q14257 317 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 PLCL1Q15111 1095 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 FBXO48Q5FWF7 155 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 LCN10Q6JVE6 187 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 PWWP2BQ6NUJ5 590 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 RAB42Q8N4Z0 105 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 AGBL5Q8NDL9 886 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 OR4F6Q8NGB9 312 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 WDR36Q8NI36 951 aaKnown RBP10.11□□□□□ -0.79
NUP98-205ENST00000397007 PRDM7Q9NQW5 492 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 STK38LQ9Y2H1 464 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 MRPS2Q9Y399 296 aaKnown RBP10.11□□□□□ -0.79
NUP98-205ENST00000397007 MED19A0JLT2 244 aaPredicted RBP10.1□□□□□ -0.79
NUP98-205ENST00000397007 ITM2AO43736 263 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 TRIM13O60858 407 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 MYL2P10916 166 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 MPSTP25325 297 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 HNF4AP41235 474 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 LAPTM5Q13571 262 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 FAM53BQ14153 422 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 GPR19Q15760 415 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 TBC1D25Q3MII6 688 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 AMZ1Q400G9 498 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 GARNL3Q5VVW2 1013 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 FAM198BQ6UWH4 519 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 OR7G3Q8NG95 312 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 MS4A6EQ96DS6 147 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 STMN4Q9H169 189 aaPredicted RBP10.1□□□□□ -0.79
NUP98-205ENST00000397007 PRDM9Q9NQV7 894 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 CD274Q9NZQ7 290 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 SMIM23A6NLE4 172 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 H0YGG7 62 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 H7BY64 318 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 TAF4O00268 1085 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 PLD2O14939 933 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 RECKO95980 971 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 ENO1P06733 434 aaKnown RBP10.1□□□□□ -0.79
NUP98-205ENST00000397007 SERPINA6P08185 405 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 SOX18P35713 384 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 TSFMP43897 325 aaKnown RBP10.1□□□□□ -0.79
NUP98-205ENST00000397007 C21orf58P58505 322 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 ARF3P61204 181 aaPredicted RBP10.1□□□□□ -0.79
NUP98-205ENST00000397007 CUL3Q13618 768 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 GALNT18Q6P9A2 607 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 MCATQ8IVS2 390 aaKnown RBP10.1□□□□□ -0.79
NUP98-205ENST00000397007 SYTL1Q8IYJ3 562 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 PRAP1Q96NZ9 151 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 TEFMQ96QE5 360 aaKnown RBP10.1□□□□□ -0.79
NUP98-205ENST00000397007 IPPKQ9H8X2 491 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 DMRT3Q9NQL9 472 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 OPTCQ9UBM4 332 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 RUVBL1Q9Y265 456 aaKnown RBP10.1□□□□□ -0.79
NUP98-205ENST00000397007 RNF11Q9Y3C5 154 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 NBEAQ8NFP9 2946 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 TLDC2A0PJX2 215 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 CRTC2Q53ET0 693 aaPredicted RBP10.1□□□□□ -0.79
NUP98-205ENST00000397007 IRGCQ6NXR0 463 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 FRA10AC1Q70Z53 315 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 RAB11FIP2Q7L804 512 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 C17orf64Q86WR6 236 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 C2orf73Q8N5S3 287 aaPredicted RBP10.1□□□□□ -0.79
NUP98-205ENST00000397007 ADAMTS17Q8TE56 1095 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 UTP15Q8TED0 518 aaKnown RBP10.1□□□□□ -0.79
NUP98-205ENST00000397007 MVB12AQ96EY5 273 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 SCNM1Q9BWG6 230 aa10.1□□□□□ -0.79
NUP98-205ENST00000397007 SPRTNQ9H040 489 aaPredicted RBP10.1□□□□□ -0.79
NUP98-205ENST00000397007 NOL11Q9H8H0 719 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms