RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 PYURFQ96I23 114 aa15.18■□□□□ 0.02
GNE-202ENST00000396594 SLC39A3Q9BRY0 314 aa15.18■□□□□ 0.02
GNE-202ENST00000396594 UCK2Q9BZX2 261 aa15.18■□□□□ 0.02
GNE-202ENST00000396594 RNF39Q9H2S5 420 aa15.18■□□□□ 0.02
GNE-202ENST00000396594 TTYH1Q9H313 450 aaPredicted RBP15.18■□□□□ 0.02
GNE-202ENST00000396594 FAM240BA0A1B0GVZ2 78 aa15.18■□□□□ 0.02
GNE-202ENST00000396594 SYPP08247 313 aa15.18■□□□□ 0.02
GNE-202ENST00000396594 ZNF20P17024 532 aa15.18■□□□□ 0.02
GNE-202ENST00000396594 RAPSNQ13702 412 aa15.18■□□□□ 0.02
GNE-202ENST00000396594 TRMT10BQ6PF06 316 aaKnown RBP15.18■□□□□ 0.02
GNE-202ENST00000396594 USP30Q70CQ3 517 aa15.18■□□□□ 0.02
GNE-202ENST00000396594 ZBED3Q96IU2 234 aaPredicted RBP15.18■□□□□ 0.02
GNE-202ENST00000396594 ZNF570Q96NI8 536 aa15.18■□□□□ 0.02
GNE-202ENST00000396594 CIB1Q99828 191 aa15.18■□□□□ 0.02
GNE-202ENST00000396594 RGS17Q9UGC6 210 aaPredicted RBP15.18■□□□□ 0.02
GNE-202ENST00000396594 PHYHO14832 338 aa15.18■□□□□ 0.02
GNE-202ENST00000396594 COCHO43405 550 aa15.18■□□□□ 0.02
GNE-202ENST00000396594 DUX1O43812 170 aa15.18■□□□□ 0.02
GNE-202ENST00000396594 DLX3O60479 287 aa15.18■□□□□ 0.02
GNE-202ENST00000396594 ZNF432O94892 652 aa15.18■□□□□ 0.02
GNE-202ENST00000396594 C1GALT1C1LP0DN25 315 aa15.18■□□□□ 0.02
GNE-202ENST00000396594 ALDH3A2P51648 485 aa15.18■□□□□ 0.02
GNE-202ENST00000396594 PRPF38BQ5VTL8 546 aaKnown RBP15.18■□□□□ 0.02
GNE-202ENST00000396594 OR5L2Q8NGL0 311 aa15.18■□□□□ 0.02
GNE-202ENST00000396594 LMO3Q8TAP4 145 aa15.18■□□□□ 0.02
GNE-202ENST00000396594 FEM1AQ9BSK4 669 aa15.18■□□□□ 0.02
GNE-202ENST00000396594 COPS4Q9BT78 406 aa15.18■□□□□ 0.02
GNE-202ENST00000396594 B4GALT7Q9UBV7 327 aa15.18■□□□□ 0.02
GNE-202ENST00000396594 B4GALT6Q9UBX8 382 aa15.18■□□□□ 0.02
GNE-202ENST00000396594 GMEB2Q9UKD1 530 aa15.18■□□□□ 0.02
GNE-202ENST00000396594 CLDN25C9JDP6 229 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 NDUFS4O43181 175 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 IDH3BO43837 385 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 RHOP08100 348 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 BMPR1AP36894 532 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 RABIFP47224 123 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 KCNC1P48547 511 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 ARHGAP40Q5TG30 622 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 REEP3Q6NUK4 255 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 RASGRP3Q8IV61 690 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 SMG8Q8ND04 991 aaKnown RBP15.17■□□□□ 0.02
GNE-202ENST00000396594 TMEM125Q96AQ2 219 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 TRMT2BQ96GJ1 504 aaKnown RBP15.17■□□□□ 0.02
GNE-202ENST00000396594 KCNC2Q96PR1 638 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 BCL2L14Q9BZR8 327 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 IFT46Q9NQC8 304 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 TAS2R9Q9NYW1 312 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 OAS3Q9Y6K5 1087 aaKnown RBP15.17■□□□□ 0.02
GNE-202ENST00000396594 A0A0J9YVX5 310 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 ZNF840PA6NDX5 716 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 H0YAE9 185 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 TLR4O00206 839 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 AHSGP02765 367 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 ENGP17813 658 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 F8A1P23610 371 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 PSPHP78330 225 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 NANOGNBQ7Z5D8 188 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 C1orf52Q8N6N3 182 aaKnown RBP15.17■□□□□ 0.02
GNE-202ENST00000396594 ZNF689Q96CS4 500 aaPredicted RBP15.17■□□□□ 0.02
GNE-202ENST00000396594 STRA6Q9BX79 667 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 NSUN3Q9H649 340 aaKnown RBP15.17■□□□□ 0.02
GNE-202ENST00000396594 MCCC2Q9HCC0 563 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 TRIM39Q9HCM9 518 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 KAT7O95251 611 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 IGHEP01854 428 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 DRD1P21728 446 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 ACVRL1P37023 503 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 PLA2G16P53816 162 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 MTTPP55157 894 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 TMEM115Q12893 351 aaPredicted RBP15.17■□□□□ 0.02
GNE-202ENST00000396594 LDB1Q86U70 411 aaPredicted RBP15.17■□□□□ 0.02
GNE-202ENST00000396594 AKAP14Q86UN6 197 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 EBPLQ9BY08 206 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 TIGARQ9NQ88 270 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 HCN1O60741 890 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 MRPS14O60783 128 aaKnown RBP15.17■□□□□ 0.02
GNE-202ENST00000396594 TIMP1P01033 207 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 SRP54P61011 504 aaKnown RBP15.17■□□□□ 0.02
GNE-202ENST00000396594 MERTKQ12866 999 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 TARDBPQ13148 414 aaKnown RBP eCLIP15.17■□□□□ 0.02
GNE-202ENST00000396594 CRB2Q5IJ48 1285 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 SLC8B1Q6J4K2 584 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 OR4K14Q8NGD5 310 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 N6AMT1Q9Y5N5 214 aa15.17■□□□□ 0.02
GNE-202ENST00000396594 J3KR12 359 aa15.16■□□□□ 0.02
GNE-202ENST00000396594 ACSL1P33121 698 aa15.16■□□□□ 0.02
GNE-202ENST00000396594 RBM34P42696 430 aaKnown RBP15.16■□□□□ 0.02
GNE-202ENST00000396594 MEF2AQ02078 507 aaPredicted RBP15.16■□□□□ 0.02
GNE-202ENST00000396594 KLF1Q13351 362 aaPredicted RBP15.16■□□□□ 0.02
GNE-202ENST00000396594 E2F2Q14209 437 aa15.16■□□□□ 0.02
GNE-202ENST00000396594 PM20D1Q6GTS8 502 aa15.16■□□□□ 0.02
GNE-202ENST00000396594 OR52E8Q6IFG1 317 aa15.16■□□□□ 0.02
GNE-202ENST00000396594 FAM180AQ6UWF9 173 aa15.16■□□□□ 0.02
GNE-202ENST00000396594 OR4F6Q8NGB9 312 aa15.16■□□□□ 0.02
GNE-202ENST00000396594 OR52E4Q8NGH9 312 aa15.16■□□□□ 0.02
GNE-202ENST00000396594 GPR150Q8NGU9 434 aa15.16■□□□□ 0.02
GNE-202ENST00000396594 KAT2AQ92830 837 aa15.16■□□□□ 0.02
GNE-202ENST00000396594 NEDD4LQ96PU5 975 aa15.16■□□□□ 0.02
GNE-202ENST00000396594 SMAD5Q99717 465 aaKnown RBP15.16■□□□□ 0.02
GNE-202ENST00000396594 CST11Q9H112 138 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms