RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 CLN3Q13286 438 aa18.33■□□□□ 0.52
HOXA9-202ENST00000396345 DOC2AQ14183 400 aa18.33■□□□□ 0.52
HOXA9-202ENST00000396345 RBBP5Q15291 538 aaKnown RBP18.33■□□□□ 0.52
HOXA9-202ENST00000396345 TGIF1Q15583 401 aa18.33■□□□□ 0.52
HOXA9-202ENST00000396345 FAM214AQ32MH5 1076 aa18.33■□□□□ 0.52
HOXA9-202ENST00000396345 PRAMEF9Q5VWM5 478 aa18.33■□□□□ 0.52
HOXA9-202ENST00000396345 RHBDD2Q6NTF9 364 aa18.33■□□□□ 0.52
HOXA9-202ENST00000396345 VN1R4Q7Z5H5 301 aa18.33■□□□□ 0.52
HOXA9-202ENST00000396345 SLC22A9Q8IVM8 553 aa18.33■□□□□ 0.52
HOXA9-202ENST00000396345 KRT78Q8N1N4 520 aa18.33■□□□□ 0.52
HOXA9-202ENST00000396345 NKD1Q969G9 470 aa18.33■□□□□ 0.52
HOXA9-202ENST00000396345 WDR34Q96EX3 536 aa18.33■□□□□ 0.52
HOXA9-202ENST00000396345 PTCD3Q96EY7 689 aaKnown RBP18.33■□□□□ 0.52
HOXA9-202ENST00000396345 DCBLD2Q96PD2 775 aa18.33■□□□□ 0.52
HOXA9-202ENST00000396345 NLNQ9BYT8 704 aa18.33■□□□□ 0.52
HOXA9-202ENST00000396345 DPH1Q9BZG8 443 aa18.33■□□□□ 0.52
HOXA9-202ENST00000396345 C12orf65Q9H3J6 166 aaKnown RBP18.33■□□□□ 0.52
HOXA9-202ENST00000396345 TXLNGQ9NUQ3 528 aa18.33■□□□□ 0.52
HOXA9-202ENST00000396345 PCTPQ9UKL6 214 aa18.33■□□□□ 0.52
HOXA9-202ENST00000396345 PLLPQ9Y342 182 aa18.33■□□□□ 0.52
HOXA9-202ENST00000396345 KMT2BQ9UMN6 2715 aaPredicted RBP18.32■□□□□ 0.52
HOXA9-202ENST00000396345 HYKKA2RU49 373 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 G3V2L1 256 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 P2RX6O15547 441 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 STATHP02808 62 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 KLK3P07288 261 aaPredicted RBP18.32■□□□□ 0.52
HOXA9-202ENST00000396345 RPS17P08708 135 aaKnown RBP18.32■□□□□ 0.52
HOXA9-202ENST00000396345 CREB1P16220 341 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 AHRP35869 848 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 CASP2P42575 452 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 GCGRP47871 477 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 PCDH1Q08174 1060 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 GPS2Q13227 327 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 LAPTM5Q13571 262 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 COL9A2Q14055 689 aaPredicted RBP18.32■□□□□ 0.52
HOXA9-202ENST00000396345 TBCCQ15814 346 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 HKDC1Q2TB90 917 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 PRTGQ2VWP7 1150 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 ZYG11AQ6WRX3 759 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 ASPGQ86U10 573 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 DSELQ8IZU8 1212 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 IL22RA1Q8N6P7 574 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 CAMKVQ8NCB2 501 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 RDH11Q8TC12 318 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 SLC13A3Q8WWT9 602 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 TM4SF19Q96DZ7 209 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 LRFN5Q96NI6 719 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 EFCAB11Q9BUY7 163 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 PITHD1Q9GZP4 211 aaPredicted RBP18.32■□□□□ 0.52
HOXA9-202ENST00000396345 NT5DC2Q9H857 520 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 IPPKQ9H8X2 491 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 CUTCQ9NTM9 273 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 DHCR7Q9UBM7 475 aaKnown RBP18.32■□□□□ 0.52
HOXA9-202ENST00000396345 PADI1Q9ULC6 663 aa18.32■□□□□ 0.52
HOXA9-202ENST00000396345 RUVBL1Q9Y265 456 aaKnown RBP18.32■□□□□ 0.52
HOXA9-202ENST00000396345 CACNA1BQ00975 2339 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 GOLGA6L10A6NI86 522 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 MEN1O00255 615 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 KLK10O43240 276 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 WFS1O76024 890 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 ALAS2P22557 587 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 RORAP35398 523 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 PRKAA2P54646 552 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 EMP3P54852 163 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 HERVK_113P63132 956 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 HIST2H2ACQ16777 129 aaPredicted RBP18.31■□□□□ 0.52
HOXA9-202ENST00000396345 TNFAIP8L3Q5GJ75 292 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 PAGE2BQ5JRK9 111 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 C1orf189Q5VU69 101 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 HIST2H2AA3Q6FI13 130 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 TMIGD1Q6UXZ0 262 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 LRRC69Q6ZNQ3 347 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 TTLL10Q6ZVT0 673 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 HDXQ7Z353 690 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 EXOC3L1Q86VI1 746 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 ANKRD53Q8N9V6 530 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 ARMC2Q8NEN0 867 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 ZNF483Q8TF39 744 aaPredicted RBP18.31■□□□□ 0.52
HOXA9-202ENST00000396345 MR1Q95460 341 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 ATP6V1E2Q96A05 226 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 CCDC126Q96EE4 140 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 NSUN5Q96P11 429 aaKnown RBP18.31■□□□□ 0.52
HOXA9-202ENST00000396345 C1QTNF3Q9BXJ4 246 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 ERVK-6Q9BXR3 956 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 STMN4Q9H169 189 aaPredicted RBP18.31■□□□□ 0.52
HOXA9-202ENST00000396345 NOL11Q9H8H0 719 aaKnown RBP18.31■□□□□ 0.52
HOXA9-202ENST00000396345 LHX9Q9NQ69 397 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 NDOR1Q9UHB4 597 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 ZFP69BQ9UJL9 534 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 MID2Q9UJV3 735 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 SEC16AO15027 2179 aa18.31■□□□□ 0.52
HOXA9-202ENST00000396345 DSCR3O14972 297 aa18.3■□□□□ 0.52
HOXA9-202ENST00000396345 SERPIND1P05546 499 aa18.3■□□□□ 0.52
HOXA9-202ENST00000396345 CPA3P15088 417 aa18.3■□□□□ 0.52
HOXA9-202ENST00000396345 CD22P20273 847 aa18.3■□□□□ 0.52
HOXA9-202ENST00000396345 IMPDH1P20839 514 aa18.3■□□□□ 0.52
HOXA9-202ENST00000396345 STAT5AP42229 794 aa18.3■□□□□ 0.52
HOXA9-202ENST00000396345 CCNG1P51959 295 aa18.3■□□□□ 0.52
HOXA9-202ENST00000396345 ABHD18Q0P651 414 aa18.3■□□□□ 0.52
HOXA9-202ENST00000396345 E2F2Q14209 437 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms