RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 UGT1A4P22310 534 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 CD47Q08722 323 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 GALNT2Q10471 571 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 ARFRP1Q13795 201 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 OCLNQ16625 522 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 SLC51AQ86UW1 340 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 GHDCQ8N2G8 530 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 OR4F6Q8NGB9 312 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 OR56A1Q8NGH5 318 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 ITPAQ9BY32 194 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 PTGES2Q9H7Z7 377 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 VRTNQ9H8Y1 702 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 SIX2Q9NPC8 291 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 NLE1Q9NVX2 485 aaPredicted RBP5.3□□□□□ -1.56
VPS13C-204ENST00000395898 WRAP73Q9P2S5 460 aaPredicted RBP5.3□□□□□ -1.56
VPS13C-204ENST00000395898 COL1A1P02452 1464 aaPredicted RBP5.3□□□□□ -1.56
VPS13C-204ENST00000395898 M0R2N6 131 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 CAPN5O15484 640 aaPredicted RBP5.3□□□□□ -1.56
VPS13C-204ENST00000395898 HOXD8P13378 290 aaPredicted RBP5.3□□□□□ -1.56
VPS13C-204ENST00000395898 RPL17P18621 184 aaKnown RBP5.3□□□□□ -1.56
VPS13C-204ENST00000395898 MAGEA11P43364 429 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 RING1Q06587 406 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF763Q0D2J5 394 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 ABHD18Q0P651 414 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 TRAM1Q15629 374 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 LRRC73Q5JTD7 316 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 LRIF1Q5T3J3 769 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 OGFOD2Q6N063 350 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 CEP76Q8TAP6 659 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 TRIB3Q96RU7 358 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 STOX2Q9P2F5 926 aaPredicted RBP5.3□□□□□ -1.56
VPS13C-204ENST00000395898 SRRDQ9UH36 339 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 PTBP2Q9UKA9 531 aaKnown RBP5.3□□□□□ -1.56
VPS13C-204ENST00000395898 IFT52Q9Y366 437 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 CICQ96RK0 1608 aaPredicted RBP5.3□□□□□ -1.56
VPS13C-204ENST00000395898 ITGB4P16144 1822 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 TPD52L2O43399 206 aaKnown RBP5.3□□□□□ -1.56
VPS13C-204ENST00000395898 FGF18O76093 207 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 PVALBP20472 110 aaPredicted RBP5.3□□□□□ -1.56
VPS13C-204ENST00000395898 CHRNA4P43681 627 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 EGFLAMQ63HQ2 1017 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 LRRC66Q68CR7 880 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 ZDHHC24Q6UX98 284 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF550Q7Z398 422 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 SMPDL3BQ92485 455 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 S100A16Q96FQ6 103 aaKnown RBP5.3□□□□□ -1.56
VPS13C-204ENST00000395898 FAM84AQ96KN4 292 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 CMKLR1Q99788 373 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 ORAI3Q9BRQ5 295 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 RIOK2Q9BVS4 552 aaKnown RBP5.3□□□□□ -1.56
VPS13C-204ENST00000395898 PCDHAC1Q9H158 963 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 ACTL8Q9H568 366 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 LDAHQ9H6V9 325 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 CCSER2Q9H7U1 834 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 BRD7Q9NPI1 651 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 PCDHB3Q9Y5E6 796 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 PRSS51A0A1B0GVH4 220 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 NPIPA5E9PKD4 350 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 FZD9O00144 591 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 UGT1A9O60656 530 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 UGT1A6P19224 532 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 UGT1A1P22309 533 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 MS4A13Q5J8X5 152 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 CLEC12AQ5QGZ9 265 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 ZBTB46Q86UZ6 589 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 RHEBL1Q8TAI7 183 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 UGT1A7Q9HAW7 530 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 UGT1A10Q9HAW8 530 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 UGT1A8Q9HAW9 530 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 CYTH4Q9UIA0 394 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 LAMP5Q9UJQ1 280 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 NPIPA1Q9UND3 350 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 ALPIP09923 528 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 ACSBG2Q5FVE4 666 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 PHF19Q5T6S3 580 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF227Q86WZ6 799 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 FAM86B1Q8N7N1 296 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 TMIEQ8NEW7 156 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 ZUFSPQ96AP4 578 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 ZFP3Q96NJ6 502 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 TTYH1Q9H313 450 aaPredicted RBP5.3□□□□□ -1.56
VPS13C-204ENST00000395898 EBF3Q9H4W6 596 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 METTL8Q9H825 291 aaKnown RBP5.3□□□□□ -1.56
VPS13C-204ENST00000395898 SIRPGQ9P1W8 387 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 GRHPRQ9UBQ7 328 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 NINQ8N4C6 2090 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF670-ZNF695F2Z2N8 137 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 J3KR12 359 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 TMEM63AO94886 807 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 CLDN7O95471 211 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 KCNC1P48547 511 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 PON3Q15166 354 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 TSC22D1Q15714 1073 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 GFOD2Q3B7J2 385 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 RNASE12Q5GAN4 147 aaKnown RBP5.3□□□□□ -1.56
VPS13C-204ENST00000395898 COLEC12Q5KU26 742 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 EPGNQ6UW88 154 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF782Q6ZMW2 699 aaPredicted RBP5.3□□□□□ -1.56
VPS13C-204ENST00000395898 RNF19BQ6ZMZ0 732 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 RELL1Q8IUW5 271 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms