RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 DNAJC22Q8N4W6 341 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 PHOX2BQ99453 314 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 ADGRE3Q9BY15 652 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 FBXO44Q9H4M3 255 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 ABCB9Q9NP78 766 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 SH3BP4Q9P0V3 963 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 PSORS1C1Q9UIG5 152 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 TBC1D24Q9ULP9 559 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 MAGEB17A8MXT2 336 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 CPNE3O75131 537 aaKnown RBP13.84□□□□□ -0.19
CLIP2-203ENST00000395060 APOL3O95236 402 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 ASGR1P07306 291 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 RPIAP49247 311 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 MRPL19P49406 292 aaKnown RBP13.84□□□□□ -0.19
CLIP2-203ENST00000395060 UGT2B15P54855 530 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 YBEYP58557 167 aaPredicted RBP13.84□□□□□ -0.19
CLIP2-203ENST00000395060 PAMR1Q6UXH9 720 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 PTOV1Q86YD1 416 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 B3GNT7Q8NFL0 401 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 KBTBD8Q8NFY9 601 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 FOXJ1Q92949 421 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 MOV10Q9HCE1 1003 aaKnown RBP13.84□□□□□ -0.19
CLIP2-203ENST00000395060 C11orf16Q9NQ32 467 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 VPS9D1Q9Y2B5 631 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 EFCAB10A6NFE3 127 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 CLCA1A8K7I4 914 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 MEN1O00255 615 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 WNT9AO14904 365 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 SOX14O95416 240 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 ELNP15502 786 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 ZNF7P17097 686 aaPredicted RBP13.84□□□□□ -0.19
CLIP2-203ENST00000395060 SOX6P35712 828 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 FLT3LGP49771 235 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 TUBA1BP68363 451 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 FADDQ13158 208 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 RFLNAQ6ZTI6 216 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 TUBA1AQ71U36 451 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 NLRP8Q86W28 1048 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 CARNMT1Q8N4J0 409 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 CAMKK1Q8N5S9 505 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 OR5AK3PQ8NH89 298 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 MYDGFQ969H8 173 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 SUSD3Q96L08 255 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 SLC30A2Q9BRI3 323 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 IRF2BPLQ9H1B7 796 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 MBD1Q9UIS9 605 aaPredicted RBP13.84□□□□□ -0.19
CLIP2-203ENST00000395060 ACSL6Q9UKU0 697 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 FZD4Q9ULV1 537 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 GRXCR2A6NFK2 248 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 M0QZQ0 153 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 DUSP11O75319 330 aaKnown RBP13.83□□□□□ -0.2
CLIP2-203ENST00000395060 C9P02748 559 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 CDK1P06493 297 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 IGFBP1P08833 259 aaPredicted RBP13.83□□□□□ -0.2
CLIP2-203ENST00000395060 MAGEA2P43356 314 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 CXCR4P61073 352 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 RHOAP61586 193 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 LEXMQ3ZCV2 418 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 Q5BKY6 102 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 FAM209AQ5JX71 171 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 C10orf62Q5T681 223 aaPredicted RBP13.83□□□□□ -0.2
CLIP2-203ENST00000395060 ABI3BPQ7Z7G0 1075 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 IFNL1Q8IU54 200 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 OR10G2Q8NGC3 310 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 IPCEF1Q8WWN9 437 aaPredicted RBP13.83□□□□□ -0.2
CLIP2-203ENST00000395060 LYVE1Q9Y5Y7 322 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 DRGXA6NNA5 263 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 SMLR1H3BR10 107 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 SUV39H1O43463 412 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 PCDH7O60245 1069 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 CHRNB1P11230 501 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 PRKCAP17252 672 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 CLDN8P56748 225 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 ZNF45Q02386 682 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 DSC3Q14574 896 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 ZXDCQ2QGD7 858 aaPredicted RBP13.83□□□□□ -0.2
CLIP2-203ENST00000395060 ZNF544Q6NX49 715 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 REM2Q8IYK8 340 aaPredicted RBP13.83□□□□□ -0.2
CLIP2-203ENST00000395060 ZBTB2Q8N680 514 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 OR4K1Q8NGD4 311 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 NELL1Q92832 810 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 PEX13Q92968 403 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 WBP2Q969T9 261 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 MGLLQ99685 303 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 ABCB8Q9NUT2 735 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 CLEC2DQ9UHP7 191 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 MOSPD1Q9UJG1 213 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 PCDHB5Q9Y5E4 795 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 PIKFYVEQ9Y2I7 2098 aa13.83□□□□□ -0.2
CLIP2-203ENST00000395060 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.82□□□□□ -0.2
CLIP2-203ENST00000395060 SEMA3DO95025 777 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 RAB25P57735 213 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 ZNF177Q13360 481 aaPredicted RBP13.82□□□□□ -0.2
CLIP2-203ENST00000395060 CHRNA6Q15825 494 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 KCNA10Q16322 511 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 EXOC3L2Q2M3D2 409 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 TSPAN33Q86UF1 283 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 FAM124AQ86V42 546 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 LGI4Q8N135 537 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 NAGSQ8N159 534 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms