RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 KLF1Q13351 362 aaPredicted RBP14.9□□□□□ -0.02
SNCA-205ENST00000394991 SLC25A25Q6KCM7 469 aa14.9□□□□□ -0.02
SNCA-205ENST00000394991 PAPD4Q6PIY7 484 aaKnown RBP14.9□□□□□ -0.02
SNCA-205ENST00000394991 PPP1R21Q6ZMI0 780 aa14.9□□□□□ -0.02
SNCA-205ENST00000394991 ZNF227Q86WZ6 799 aa14.9□□□□□ -0.02
SNCA-205ENST00000394991 CPSF7Q8N684 471 aaKnown RBP14.9□□□□□ -0.02
SNCA-205ENST00000394991 PPFIBP2Q8ND30 876 aa14.9□□□□□ -0.02
SNCA-205ENST00000394991 M1APQ8TC57 530 aa14.9□□□□□ -0.02
SNCA-205ENST00000394991 MRFAP1L1Q96HT8 127 aa14.9□□□□□ -0.02
SNCA-205ENST00000394991 MMP25Q9NPA2 562 aa14.9□□□□□ -0.02
SNCA-205ENST00000394991 COQ3Q9NZJ6 369 aa14.9□□□□□ -0.02
SNCA-205ENST00000394991 ANAPC5Q9UJX4 755 aa14.9□□□□□ -0.02
SNCA-205ENST00000394991 TCRBV7S2A1N4TA0A589 114 aa14.89□□□□□ -0.03
SNCA-205ENST00000394991 H0YIG0 161 aa14.89□□□□□ -0.03
SNCA-205ENST00000394991 TXNDC9O14530 226 aa14.89□□□□□ -0.03
SNCA-205ENST00000394991 KPNA5O15131 536 aa14.89□□□□□ -0.03
SNCA-205ENST00000394991 NIPSNAP2O75323 286 aa14.89□□□□□ -0.03
SNCA-205ENST00000394991 NSA2O95478 260 aaKnown RBP14.89□□□□□ -0.03
SNCA-205ENST00000394991 PKMP14618 531 aaKnown RBP14.89□□□□□ -0.03
SNCA-205ENST00000394991 IL1RNP18510 177 aa14.89□□□□□ -0.03
SNCA-205ENST00000394991 DNAJA1P31689 397 aaKnown RBP14.89□□□□□ -0.03
SNCA-205ENST00000394991 CETN2P41208 172 aa14.89□□□□□ -0.03
SNCA-205ENST00000394991 XCR1P46094 333 aa14.89□□□□□ -0.03
SNCA-205ENST00000394991 RELAQ04206 551 aa14.89□□□□□ -0.03
SNCA-205ENST00000394991 EXT1Q16394 746 aa14.89□□□□□ -0.03
SNCA-205ENST00000394991 NDUFA9Q16795 377 aa14.89□□□□□ -0.03
SNCA-205ENST00000394991 ANKRD20A4Q4UJ75 823 aa14.89□□□□□ -0.03
SNCA-205ENST00000394991 VN1R4Q7Z5H5 301 aa14.89□□□□□ -0.03
SNCA-205ENST00000394991 LRRC6Q86X45 466 aa14.89□□□□□ -0.03
SNCA-205ENST00000394991 TC2NQ8N9U0 490 aa14.89□□□□□ -0.03
SNCA-205ENST00000394991 FAM98AQ8NCA5 519 aaKnown RBP14.89□□□□□ -0.03
SNCA-205ENST00000394991 OR51Q1Q8NH59 317 aa14.89□□□□□ -0.03
SNCA-205ENST00000394991 PEX13Q92968 403 aa14.89□□□□□ -0.03
SNCA-205ENST00000394991 FAM136AQ96C01 138 aa14.89□□□□□ -0.03
SNCA-205ENST00000394991 BIRC8Q96P09 236 aa14.89□□□□□ -0.03
SNCA-205ENST00000394991 PKP4Q99569 1192 aa14.89□□□□□ -0.03
SNCA-205ENST00000394991 UCK2Q9BZX2 261 aa14.89□□□□□ -0.03
SNCA-205ENST00000394991 CHRAC1Q9NRG0 131 aa14.89□□□□□ -0.03
SNCA-205ENST00000394991 LRFN1Q9P244 771 aa14.89□□□□□ -0.03
SNCA-205ENST00000394991 GALPQ9UBC7 116 aa14.89□□□□□ -0.03
SNCA-205ENST00000394991 DUSP10Q9Y6W6 482 aa14.89□□□□□ -0.03
SNCA-205ENST00000394991 DNHD1Q96M86 4753 aa14.89□□□□□ -0.03
SNCA-205ENST00000394991 FAM90A27PA6NNH2 459 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 NME2P1O60361 137 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 SLC25A12O75746 678 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 TOXO94900 526 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 CCNDBP1O95273 360 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 NME2P22392 152 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 ATP5DP30049 168 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 AGTR2P50052 363 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 IST1P53990 364 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 PNLIPRP1P54315 467 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 PTK6Q13882 451 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 ARHGAP19Q14CB8 494 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 MAPKAPK3Q16644 382 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 SFT2D3Q587I9 215 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 ACSBG2Q5FVE4 666 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 CEP128Q6ZU80 1094 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 ADCK2Q7Z695 626 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 CD163Q86VB7 1156 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 TMEM200AQ86VY9 491 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 SPNS2Q8IVW8 549 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 DMRTC2Q8IXT2 367 aaPredicted RBP14.88□□□□□ -0.03
SNCA-205ENST00000394991 EID3Q8N140 333 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 SLC5A8Q8N695 610 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 FAM57AQ8TBR7 257 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 OLFM1Q99784 485 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 MACROD1Q9BQ69 325 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 CXXC4Q9H2H0 198 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 CDCP1Q9H5V8 836 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 TREX1Q9NSU2 369 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 RNF6Q9Y252 685 aa14.88□□□□□ -0.03
SNCA-205ENST00000394991 GOLGA6L9A6NEM1 432 aa14.87□□□□□ -0.03
SNCA-205ENST00000394991 SGK494L7N484 410 aa14.87□□□□□ -0.03
SNCA-205ENST00000394991 PSIP1O75475 530 aaKnown RBP14.87□□□□□ -0.03
SNCA-205ENST00000394991 NDUFS3O75489 264 aa14.87□□□□□ -0.03
SNCA-205ENST00000394991 TPOP07202 933 aa14.87□□□□□ -0.03
SNCA-205ENST00000394991 MSX1P28360 303 aa14.87□□□□□ -0.03
SNCA-205ENST00000394991 RHAGQ02094 409 aa14.87□□□□□ -0.03
SNCA-205ENST00000394991 USP10Q14694 798 aaKnown RBP14.87□□□□□ -0.03
SNCA-205ENST00000394991 PRUNE1Q86TP1 453 aa14.87□□□□□ -0.03
SNCA-205ENST00000394991 TGIF2LYQ8IUE0 185 aa14.87□□□□□ -0.03
SNCA-205ENST00000394991 LGI4Q8N135 537 aa14.87□□□□□ -0.03
SNCA-205ENST00000394991 MPP5Q8N3R9 675 aa14.87□□□□□ -0.03
SNCA-205ENST00000394991 RPRMLQ8N4K4 120 aa14.87□□□□□ -0.03
SNCA-205ENST00000394991 KIF2BQ8N4N8 673 aa14.87□□□□□ -0.03
SNCA-205ENST00000394991 HORMAD2Q8N7B1 307 aa14.87□□□□□ -0.03
SNCA-205ENST00000394991 LRRC57Q8N9N7 239 aa14.87□□□□□ -0.03
SNCA-205ENST00000394991 PPHLN1Q8NEY8 458 aaKnown RBP14.87□□□□□ -0.03
SNCA-205ENST00000394991 LILRB4Q8NHJ6 448 aa14.87□□□□□ -0.03
SNCA-205ENST00000394991 ZNF480Q8WV37 535 aa14.87□□□□□ -0.03
SNCA-205ENST00000394991 ATG4AQ8WYN0 398 aa14.87□□□□□ -0.03
SNCA-205ENST00000394991 TSLPQ969D9 159 aa14.87□□□□□ -0.03
SNCA-205ENST00000394991 CCDC138Q96M89 665 aa14.87□□□□□ -0.03
SNCA-205ENST00000394991 ZNF559Q9BR84 538 aa14.87□□□□□ -0.03
SNCA-205ENST00000394991 RBCK1Q9BYM8 510 aa14.87□□□□□ -0.03
SNCA-205ENST00000394991 ABCF3Q9NUQ8 709 aa14.87□□□□□ -0.03
SNCA-205ENST00000394991 UTP6Q9NYH9 597 aaKnown RBP14.87□□□□□ -0.03
SNCA-205ENST00000394991 EML6Q6ZMW3 1958 aa14.86□□□□□ -0.03
SNCA-205ENST00000394991 A0A1B0GTH9 108 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms