RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 DSC3Q14574 896 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 OGFOD2Q6N063 350 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 AGTRAPQ6RW13 159 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 SDR16C5Q8N3Y7 309 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 FCGR1BQ92637 280 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 BADQ92934 168 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 EBF4Q9BQW3 602 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 DENND2DQ9H6A0 471 aaPredicted RBP10.09□□□□□ -0.79
COL4A6-203ENST00000394872 DNAJB4Q9UDY4 337 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 CA14Q9ULX7 337 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 MEMO1Q9Y316 297 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 TRBC2A0A5B9 178 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 CNTN5O94779 1100 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 CSN2P05814 226 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 FHP07954 510 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 NR2C1P13056 603 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 DNAJA1P31689 397 aaKnown RBP10.09□□□□□ -0.79
COL4A6-203ENST00000394872 GDF5P43026 501 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 SERINC3Q13530 473 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 FAM182AQ5T1J6 154 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 NOXRED1Q6NXP6 359 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 CLDN19Q8N6F1 224 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 NAXEQ8NCW5 288 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 OR6N1Q8NGY5 312 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 THEM6Q8WUY1 208 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 OR51B5Q9H339 312 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 PTGES2Q9H7Z7 377 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 COMMD3Q9UBI1 195 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 KCTD3Q9Y597 815 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 A0A0D9SEW6 157 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 OR14I1A6ND48 311 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 CXorf49A8MYA2 514 aaPredicted RBP10.09□□□□□ -0.79
COL4A6-203ENST00000394872 C2orf74A8MZ97 194 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 ZNF670-ZNF695F2Z2N8 137 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 RCBTB2O95199 551 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 PRH1P02810 166 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 CSTBP04080 98 aaKnown RBP10.09□□□□□ -0.79
COL4A6-203ENST00000394872 GJA8P48165 433 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 CSTF1Q05048 431 aaKnown RBP10.09□□□□□ -0.79
COL4A6-203ENST00000394872 TMEM115Q12893 351 aaPredicted RBP10.09□□□□□ -0.79
COL4A6-203ENST00000394872 TXNRD3NBQ6F5E7 133 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 TLCD1Q96CP7 247 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 CCDC115Q96NT0 180 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 ACTL8Q9H568 366 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 KAT8Q9H7Z6 458 aaKnown RBP10.09□□□□□ -0.79
COL4A6-203ENST00000394872 CREBZFQ9NS37 354 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 HRASLS2Q9NWW9 162 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 B4GALT6Q9UBX8 382 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 TNFRSF10BO14763 440 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 LEFTY1O75610 366 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 INMTO95050 263 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 PGLSO95336 258 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 ID2Q02363 134 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 ERN2Q76MJ5 926 aaKnown RBP10.08□□□□□ -0.8
COL4A6-203ENST00000394872 TRIM74Q86UV6 250 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 SLC35B2Q8TB61 432 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 TESCQ96BS2 214 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 MMABQ96EY8 250 aaPredicted RBP10.08□□□□□ -0.8
COL4A6-203ENST00000394872 CADM1Q9BY67 442 aaKnown RBP10.08□□□□□ -0.8
COL4A6-203ENST00000394872 PCDHAC1Q9H158 963 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 SPHK2Q9NRA0 654 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 ZIM2Q9NZV7 527 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 MAU2Q9Y6X3 613 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 AHSGP02765 367 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 DLDP09622 509 aaKnown RBP10.08□□□□□ -0.8
COL4A6-203ENST00000394872 GSTM3P21266 225 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 FUT4P22083 530 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 DGKQP52824 942 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 AQP4P55087 323 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 EEFSECP57772 596 aaKnown RBP10.08□□□□□ -0.8
COL4A6-203ENST00000394872 OLIG2Q13516 323 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 TMCO2Q7Z6W1 182 aaPredicted RBP10.08□□□□□ -0.8
COL4A6-203ENST00000394872 TUBA8Q9NY65 449 aaPredicted RBP10.08□□□□□ -0.8
COL4A6-203ENST00000394872 POMPQ9Y244 141 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 RNF11Q9Y3C5 154 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 ANKRD26Q9UPS8 1709 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 ZNF878C9JN71 531 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 CSF2RAP15509 400 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 BMP8BP34820 402 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 SHMT2P34897 504 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 CDKL1Q00532 357 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 SLC25A11Q02978 314 aaKnown RBP10.08□□□□□ -0.8
COL4A6-203ENST00000394872 KCNJ11Q14654 390 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 PTCHD3Q3KNS1 767 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 ZNF805Q5CZA5 627 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 RBM20Q5T481 1227 aaKnown RBP10.08□□□□□ -0.8
COL4A6-203ENST00000394872 BMP8AQ7Z5Y6 402 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 ZNF101Q8IZC7 436 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 DERL2Q9GZP9 239 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 RC3H2Q9HBD1 1191 aaKnown RBP10.08□□□□□ -0.8
COL4A6-203ENST00000394872 IL21RQ9HBE5 538 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 NLE1Q9NVX2 485 aaPredicted RBP10.08□□□□□ -0.8
COL4A6-203ENST00000394872 GPR34Q9UPC5 381 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 FMN2Q9NZ56 1722 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 FAM170BA6NMN3 283 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 BLOC1S5-TXNDC5H3BN57 136 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 LAMTOR5O43504 91 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 VSX2P58304 361 aaPredicted RBP10.08□□□□□ -0.8
COL4A6-203ENST00000394872 TIGD6Q17RP2 521 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 TMEM198Q66K66 360 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms