RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 CRNNQ9UBG3 495 aaPredicted RBP15.61■□□□□ 0.09
PCDH1-203ENST00000394536 ANGPT4Q9Y264 503 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 MED16Q9Y2X0 877 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 SGTAO43765 313 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 ERAL1O75616 437 aaKnown RBP15.61■□□□□ 0.09
PCDH1-203ENST00000394536 IFNW1P05000 195 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 ATP1B2P14415 290 aaPredicted RBP15.61■□□□□ 0.09
PCDH1-203ENST00000394536 PSMA1P25786 263 aaKnown RBP15.61■□□□□ 0.09
PCDH1-203ENST00000394536 RFX3P48380 749 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 RPS13P62277 151 aaKnown RBP15.61■□□□□ 0.09
PCDH1-203ENST00000394536 SCARB2Q14108 478 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 DPY19L1Q2PZI1 675 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 FAM131AQ6UXB0 335 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 TSPYL5Q86VY4 417 aaPredicted RBP15.61■□□□□ 0.09
PCDH1-203ENST00000394536 FAM217AQ8IXS0 508 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 SLC5A8Q8N695 610 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 SCAIQ8N9R8 606 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 ST13P5Q8NFI4 369 aaPredicted RBP15.61■□□□□ 0.09
PCDH1-203ENST00000394536 MUL1Q969V5 352 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 ALPK1Q96QP1 1244 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 CLMPQ9H6B4 373 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 MALT1Q9UDY8 824 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 NPIPB15A6NHN6 443 aaPredicted RBP15.61■□□□□ 0.09
PCDH1-203ENST00000394536 FADS2P1A8MWK0 482 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 C6orf47O95873 294 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 MYL12AP19105 171 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 PTPN5P54829 565 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 GP2P55259 537 aaKnown RBP15.61■□□□□ 0.09
PCDH1-203ENST00000394536 PPP2R2BQ00005 443 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 AP2M1Q96CW1 435 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 TRIB3Q96RU7 358 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 RIOK2Q9BVS4 552 aaKnown RBP15.61■□□□□ 0.09
PCDH1-203ENST00000394536 PRRG3Q9BZD7 231 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 NECTIN3Q9NQS3 549 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 CORO2BQ9UQ03 480 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 APOL3O95236 402 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 CYP2A6P11509 494 aaPredicted RBP15.6■□□□□ 0.09
PCDH1-203ENST00000394536 POLR2EP19388 210 aaKnown RBP15.6■□□□□ 0.09
PCDH1-203ENST00000394536 GSTM5P46439 218 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 HSPB3Q12988 150 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 PYDC2Q56P42 97 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 CHST9Q7L1S5 443 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 LRRC70Q7Z2Q7 622 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 HMGN2P46Q86SG4 172 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 RIMKLAQ8IXN7 391 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 NAGSQ8N159 534 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 DCAF4L2Q8NA75 395 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 MBOAT4Q96T53 435 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 YME1L1Q96TA2 773 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 CSF3RQ99062 836 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 OR51E2Q9H255 320 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 ACTL8Q9H568 366 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 HMX1Q9NP08 348 aaPredicted RBP15.6■□□□□ 0.09
PCDH1-203ENST00000394536 IL1RAPQ9NPH3 570 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 ELFN1P0C7U0 828 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 CCR7P32248 378 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 DOC2AQ14183 400 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 MPPE1Q53F39 396 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 RAET1GQ6H3X3 334 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 MED27Q6P2C8 311 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 TMPRSS11AQ6ZMR5 421 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 AQP11Q8NBQ7 271 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 ZNF461Q8TAF7 563 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 EXOSC8Q96B26 276 aaKnown RBP15.6■□□□□ 0.09
PCDH1-203ENST00000394536 POLR2J2Q9GZM3 115 aaKnown RBP15.6■□□□□ 0.09
PCDH1-203ENST00000394536 TIGARQ9NQ88 270 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 TVP23BQ9NYZ1 205 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 PCDHGA10Q9Y5H3 936 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 PEX16Q9Y5Y5 336 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 BRWD3Q6RI45 1802 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 CCNB2O95067 398 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 KLK1P06870 262 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 NR2F1P10589 423 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 ANXA8P13928 327 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 NR4A2P43354 598 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 PPP5CP53041 499 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 MAD2L1BPQ15013 274 aaPredicted RBP15.6■□□□□ 0.09
PCDH1-203ENST00000394536 SOWAHCQ53LP3 525 aaPredicted RBP15.6■□□□□ 0.09
PCDH1-203ENST00000394536 CAPN13Q6MZZ7 669 aaPredicted RBP15.6■□□□□ 0.09
PCDH1-203ENST00000394536 CCBE1Q6UXH8 406 aaPredicted RBP15.6■□□□□ 0.09
PCDH1-203ENST00000394536 DPY19L3Q6ZPD9 716 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 NPAS3Q8IXF0 933 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 PAPD5Q8NDF8 572 aaKnown RBP15.6■□□□□ 0.09
PCDH1-203ENST00000394536 FOXJ1Q92949 421 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 POP5Q969H6 163 aaKnown RBP15.6■□□□□ 0.09
PCDH1-203ENST00000394536 WBP2Q969T9 261 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 REPS1Q96D71 796 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 SLC22A12Q96S37 553 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 ACOT13Q9NPJ3 140 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 DNAJC27Q9NZQ0 273 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 ITGB1BP2Q9UKP3 347 aa15.6■□□□□ 0.09
PCDH1-203ENST00000394536 HOXB6P17509 224 aaKnown RBP15.59■□□□□ 0.09
PCDH1-203ENST00000394536 TEAD4Q15561 434 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 ZFP69Q49AA0 526 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.59■□□□□ 0.09
PCDH1-203ENST00000394536 OR9Q2Q8NGE9 314 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 DPF3Q92784 378 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 DIRAS2Q96HU8 199 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 EHD1Q9H4M9 534 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 TEKT2Q9UIF3 430 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms