RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 PEX19P40855 299 aa14.5□□□□□ -0.09
GPC3-202ENST00000394299 EIF2DP41214 584 aaKnown RBP14.5□□□□□ -0.09
GPC3-202ENST00000394299 SRSF11Q05519 484 aaKnown RBP14.5□□□□□ -0.09
GPC3-202ENST00000394299 PRSS53Q2L4Q9 553 aa14.5□□□□□ -0.09
GPC3-202ENST00000394299 METRNLQ641Q3 311 aa14.5□□□□□ -0.09
GPC3-202ENST00000394299 CES5AQ6NT32 575 aa14.5□□□□□ -0.09
GPC3-202ENST00000394299 COMMD6Q7Z4G1 85 aa14.5□□□□□ -0.09
GPC3-202ENST00000394299 VN1R5Q7Z5H4 357 aa14.5□□□□□ -0.09
GPC3-202ENST00000394299 OFCC1Q8IZS5 231 aa14.5□□□□□ -0.09
GPC3-202ENST00000394299 MFSD2AQ8NA29 543 aa14.5□□□□□ -0.09
GPC3-202ENST00000394299 RAD51AP1Q96B01 352 aa14.5□□□□□ -0.09
GPC3-202ENST00000394299 SLC47A1Q96FL8 570 aa14.5□□□□□ -0.09
GPC3-202ENST00000394299 OSGEPL1Q9H4B0 414 aa14.5□□□□□ -0.09
GPC3-202ENST00000394299 LTB4R2Q9NPC1 389 aa14.5□□□□□ -0.09
GPC3-202ENST00000394299 DMRT3Q9NQL9 472 aa14.5□□□□□ -0.09
GPC3-202ENST00000394299 CUEDC1Q9NWM3 386 aaPredicted RBP14.5□□□□□ -0.09
GPC3-202ENST00000394299 TAC3Q9UHF0 121 aa14.5□□□□□ -0.09
GPC3-202ENST00000394299 MOSPD1Q9UJG1 213 aa14.5□□□□□ -0.09
GPC3-202ENST00000394299 VPS4AQ9UN37 437 aa14.5□□□□□ -0.09
GPC3-202ENST00000394299 KCNK6Q9Y257 313 aa14.5□□□□□ -0.09
GPC3-202ENST00000394299 TNFAIP8O95379 198 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 CLPTM1O96005 669 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 NTRK1P04629 796 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 COL9A1P20849 921 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 C5AR1P21730 350 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 MAPK9P45984 424 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 CDH15P55291 814 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 CYP4F2P78329 520 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 ADAM15Q13444 863 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 RBBP5Q15291 538 aaKnown RBP14.49□□□□□ -0.09
GPC3-202ENST00000394299 PRAMEF14Q5SWL7 426 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 CPTPQ5TA50 214 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 PRAMEF13Q5VWM6 474 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 KRT80Q6KB66 452 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 FAM124AQ86V42 546 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 FAM20CQ8IXL6 584 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 FAM9CQ8IZT9 166 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 GRIP2Q9C0E4 1043 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 WDR26Q9H7D7 661 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 ITM2CQ9NQX7 267 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 DCAF13Q9NV06 445 aaKnown RBP14.49□□□□□ -0.09
GPC3-202ENST00000394299 A0A1W2PQU0 124 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 FEZF1A0PJY2 475 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 FAM220BPB1ANY3 271 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 KLK1P06870 262 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 HSD3B1P14060 373 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 ACPPP15309 386 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 PRKACGP22612 351 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 HSD3B2P26439 372 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 TIA1P31483 386 aaKnown RBP eCLIP14.49□□□□□ -0.091e-6■■■■■ 133.5
GPC3-202ENST00000394299 RPS9P46781 194 aaKnown RBP14.49□□□□□ -0.09
GPC3-202ENST00000394299 STK32CQ86UX6 486 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 LAS2Q8IYD9 372 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 TP53I13Q8NBR0 393 aaPredicted RBP14.49□□□□□ -0.09
GPC3-202ENST00000394299 OR8J2Q8NGG1 315 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 BDH2Q9BUT1 245 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 TEX101Q9BY14 249 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 ANKRD60Q9BZ19 345 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 XKR8Q9H6D3 395 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 ZNF696Q9H7X3 374 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 SMURF2Q9HAU4 748 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 AASDHPPTQ9NRN7 309 aa14.49□□□□□ -0.09
GPC3-202ENST00000394299 SLC31A1O15431 190 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 ADAM23O75077 832 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 SCELO95171 688 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 KCNK5O95279 499 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 CST1P01037 141 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 ETS2P15036 469 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 ZNF33BQ06732 778 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 LRRC23Q53EV4 343 aaPredicted RBP14.48□□□□□ -0.09
GPC3-202ENST00000394299 TMEM31Q5JXX7 168 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 ZNF852Q6ZMS4 543 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 TMEM179BQ7Z7N9 219 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 PLD3Q8IV08 490 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 CIDECQ96AQ7 238 aaPredicted RBP14.48□□□□□ -0.09
GPC3-202ENST00000394299 WDR34Q96EX3 536 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 UGT2B28Q9BY64 529 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 U3KQV3 271 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 EVPLLA8MZ36 301 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 H7BY64 318 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 RTCAO00442 366 aaKnown RBP14.48□□□□□ -0.09
GPC3-202ENST00000394299 PI15O43692 258 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 NOBOXO60393 691 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 TBX6O95947 436 aaPredicted RBP14.48□□□□□ -0.09
GPC3-202ENST00000394299 EGFP01133 1207 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 KELP23276 732 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 TRIM23P36406 574 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 ABHD18Q0P651 414 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 GAB1Q13480 694 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 SPIDRQ14159 915 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 PLCL1Q15111 1095 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 SLC36A3Q495N2 470 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 CYBRD1Q53TN4 286 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 UNC5DQ6UXZ4 953 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 HOMEZQ8IX15 550 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 PACRGLQ8N7B6 248 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 OR5K2Q8NHB8 316 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 SNX19Q92543 992 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 MAL2Q969L2 176 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 PRAP1Q96NZ9 151 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms