RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 TMEM9BQ9NQ34 198 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 ANKMY1Q9P2S6 941 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 EPHA6Q9UF33 1036 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 TSC22D4Q9Y3Q8 395 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 KLK4Q9Y5K2 254 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 SERTM1A2A2V5 107 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 DLL1O00548 723 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 RGS14O43566 566 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 LRP3O75074 770 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 PEX11AO75192 247 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 VPS4BO75351 444 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 CD59P13987 128 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 ST6GAL1P15907 406 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 CSF2RBP32927 897 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 RPS13P62277 151 aaKnown RBP23.27■■□□□ 1.32
LRFN4-202ENST00000393952 CYP4F2P78329 520 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 CSTF3Q12996 717 aaKnown RBP23.27■■□□□ 1.32
LRFN4-202ENST00000393952 NR6A1Q15406 480 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 ZIC1Q15915 447 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 TMEM198Q66K66 360 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 USP53Q70EK8 1073 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 BAHD1Q8TBE0 780 aaPredicted RBP23.27■■□□□ 1.32
LRFN4-202ENST00000393952 IFI44Q8TCB0 444 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 CCDC3Q9BQI4 270 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 KCNH6Q9H252 994 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 SYNPO2LQ9H987 977 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 DMRT3Q9NQL9 472 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 PRR35P0CG20 571 aa23.26■■□□□ 1.31
LRFN4-202ENST00000393952 DUSP3P51452 185 aaPredicted RBP23.26■■□□□ 1.31
LRFN4-202ENST00000393952 CYP4F3Q08477 520 aa23.26■■□□□ 1.31
LRFN4-202ENST00000393952 NAA25Q14CX7 972 aa23.26■■□□□ 1.31
LRFN4-202ENST00000393952 C10orf62Q5T681 223 aaPredicted RBP23.26■■□□□ 1.31
LRFN4-202ENST00000393952 GBP7Q8N8V2 638 aaPredicted RBP23.26■■□□□ 1.31
LRFN4-202ENST00000393952 RHBDD1Q8TEB9 315 aa23.26■■□□□ 1.31
LRFN4-202ENST00000393952 ZDHHC12Q96GR4 267 aa23.26■■□□□ 1.31
LRFN4-202ENST00000393952 CNDP2Q96KP4 475 aaKnown RBP23.26■■□□□ 1.31
LRFN4-202ENST00000393952 TRAPPC9Q96Q05 1148 aa23.26■■□□□ 1.31
LRFN4-202ENST00000393952 SARGQ9BW04 601 aa23.26■■□□□ 1.31
LRFN4-202ENST00000393952 ZMYND15Q9H091 742 aa23.26■■□□□ 1.31
LRFN4-202ENST00000393952 KLHL3Q9UH77 587 aa23.26■■□□□ 1.31
LRFN4-202ENST00000393952 G3BP2Q9UN86 482 aaKnown RBP23.26■■□□□ 1.31
LRFN4-202ENST00000393952 ANKDD1BA6NHY2 528 aa23.25■■□□□ 1.31
LRFN4-202ENST00000393952 SLC9B1P1A6NJY1 282 aa23.25■■□□□ 1.31
LRFN4-202ENST00000393952 FOXE1O00358 373 aaPredicted RBP23.25■■□□□ 1.31
LRFN4-202ENST00000393952 LSM1O15116 133 aaKnown RBP23.25■■□□□ 1.31
LRFN4-202ENST00000393952 CTSVO60911 334 aa23.25■■□□□ 1.31
LRFN4-202ENST00000393952 SH3BGRLO75368 114 aa23.25■■□□□ 1.31
LRFN4-202ENST00000393952 ETHE1O95571 254 aa23.25■■□□□ 1.31
LRFN4-202ENST00000393952 LDOC1O95751 146 aaPredicted RBP23.25■■□□□ 1.31
LRFN4-202ENST00000393952 HSD3B1P14060 373 aa23.25■■□□□ 1.31
LRFN4-202ENST00000393952 HSD3B2P26439 372 aa23.25■■□□□ 1.31
LRFN4-202ENST00000393952 PIK3CBP42338 1070 aa23.25■■□□□ 1.31
LRFN4-202ENST00000393952 SLC14A1Q13336 389 aa23.25■■□□□ 1.31
LRFN4-202ENST00000393952 GALNTL6Q49A17 601 aa23.25■■□□□ 1.31
LRFN4-202ENST00000393952 FBXO42Q6P3S6 717 aa23.25■■□□□ 1.31
LRFN4-202ENST00000393952 TBC1D19Q8N5T2 526 aa23.25■■□□□ 1.31
LRFN4-202ENST00000393952 FCRL4Q96PJ5 515 aa23.25■■□□□ 1.31
LRFN4-202ENST00000393952 BRF2Q9HAW0 419 aa23.25■■□□□ 1.31
LRFN4-202ENST00000393952 C1GALT1Q9NS00 363 aa23.25■■□□□ 1.31
LRFN4-202ENST00000393952 SLC12A4Q9UP95 1085 aa23.25■■□□□ 1.31
LRFN4-202ENST00000393952 PCDHGA4Q9Y5G9 962 aa23.25■■□□□ 1.31
LRFN4-202ENST00000393952 TLCD2A6NGC4 264 aa23.24■■□□□ 1.31
LRFN4-202ENST00000393952 LBPP18428 481 aa23.24■■□□□ 1.31
LRFN4-202ENST00000393952 TGM1P22735 817 aa23.24■■□□□ 1.31
LRFN4-202ENST00000393952 PHEXP78562 749 aa23.24■■□□□ 1.31
LRFN4-202ENST00000393952 CCL7P80098 99 aa23.24■■□□□ 1.31
LRFN4-202ENST00000393952 ATP6AP1LQ52LC2 224 aa23.24■■□□□ 1.31
LRFN4-202ENST00000393952 C6orf136Q5SQH8 315 aa23.24■■□□□ 1.31
LRFN4-202ENST00000393952 MTDHQ86UE4 582 aaKnown RBP23.24■■□□□ 1.31
LRFN4-202ENST00000393952 C19orf47Q8N9M1 422 aaKnown RBP23.24■■□□□ 1.31
LRFN4-202ENST00000393952 MFSD9Q8NBP5 474 aa23.24■■□□□ 1.31
LRFN4-202ENST00000393952 MARK4Q96L34 752 aa23.24■■□□□ 1.31
LRFN4-202ENST00000393952 CD180Q99467 661 aa23.24■■□□□ 1.31
LRFN4-202ENST00000393952 TMEM9Q9P0T7 183 aa23.24■■□□□ 1.31
LRFN4-202ENST00000393952 ADGRE2Q9UHX3 823 aa23.24■■□□□ 1.31
LRFN4-202ENST00000393952 COL5A1P20908 1838 aaPredicted RBP23.24■■□□□ 1.31
LRFN4-202ENST00000393952 TGFB1P01137 390 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 STATHP02808 62 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 RPLP0P05388 317 aaKnown RBP23.23■■□□□ 1.31
LRFN4-202ENST00000393952 EZRP15311 586 aaKnown RBP23.23■■□□□ 1.31
LRFN4-202ENST00000393952 NCF2P19878 526 aaPredicted RBP23.23■■□□□ 1.31
LRFN4-202ENST00000393952 SERPINB1P30740 379 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 RPS15AP62244 130 aaKnown RBP23.23■■□□□ 1.31
LRFN4-202ENST00000393952 AP5B1Q2VPB7 878 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 AASDHQ4L235 1098 aaPredicted RBP23.23■■□□□ 1.31
LRFN4-202ENST00000393952 SPDYAQ5MJ70 313 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 PLXDC1Q8IUK5 500 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 PPP3R2Q96LZ3 170 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 CATSPER2Q96P56 530 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 NUDT22Q9BRQ3 303 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 NMUR2Q9GZQ4 415 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 LRTM1Q9HBL6 345 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 ZFP69BQ9UJL9 534 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 PILRAQ9UKJ1 303 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 MN1Q10571 1320 aaPredicted RBP23.23■■□□□ 1.31
LRFN4-202ENST00000393952 A0A0J9YVX5 310 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 A0A1W2PQM1 296 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 C4orf47A7E2U8 309 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 FCHO1O14526 889 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 SH3BP5O60239 455 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms