RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 SPSB2Q99619 263 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 YIPF2Q9BWQ6 316 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 PCBD2Q9H0N5 130 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 L2HGDHQ9H9P8 463 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 WWOXQ9NZC7 414 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 CD274Q9NZQ7 290 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 TLK1Q9UKI8 766 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 RNF112Q9ULX5 631 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 PADI2Q9Y2J8 665 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 DYRK1BQ9Y463 629 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 PIEZO2Q9H5I5 2752 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 A0A096LPK6 155 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 ZNF860A6NHJ4 632 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 LRRC14BA6NHZ5 514 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 SUPT3HB4E1H0 165 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 SGK494L7N484 410 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 NDUFS4O43181 175 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 RIPK2O43353 540 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 PRAMEF4O60810 478 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 DNAJB6O75190 326 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 SUPT3HO75486 399 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 PDGFAP04085 211 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 INHBAP08476 426 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 LTA4HP09960 611 aaKnown RBP7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 IL1RNP18510 177 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 CCND1P24385 295 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 GCAP28676 217 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 CRABP2P29373 138 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 HNF4AP41235 474 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 AGTR2P50052 363 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 SERPINB8P50452 374 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 CSRP3P50461 194 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 CCL11P51671 97 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 CCR8P51685 355 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 EFNA3P52797 238 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 PMS2P54278 862 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 ATP6V0D1P61421 351 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 RPS15AP62244 130 aaKnown RBP7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 OLR1P78380 273 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 CDKL1Q00532 357 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 REEP5Q00765 189 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 MUM1Q2TAK8 710 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 FAM214AQ32MH5 1076 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 CRTC2Q53ET0 693 aaPredicted RBP7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 YOD1Q5VVQ6 348 aaPredicted RBP7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 PRAMEF9Q5VWM5 478 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 FAAH2Q6GMR7 532 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 ADNP2Q6IQ32 1131 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 NXPE4Q6UWF7 544 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 CEP128Q6ZU80 1094 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 OVCH1Q7RTY7 1134 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 TBC1D1Q86TI0 1168 aaPredicted RBP7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 ASPGQ86U10 573 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 ISCA2Q86U28 154 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 PDSS2Q86YH6 399 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 PLD6Q8N2A8 252 aaKnown RBP7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 AMER3Q8N944 861 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 SNX31Q8N9S9 440 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 ANKRD53Q8N9V6 530 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 MFSD9Q8NBP5 474 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 ABHD11Q8NFV4 315 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 OR2Y1Q8NGV0 311 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 DCAKDQ8WVC6 231 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 ANKRD7Q92527 254 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 KIAA1191Q96A73 305 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 WBP1Q96G27 269 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 ABHD17AQ96GS6 310 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 HAUS8Q9BT25 410 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 DHRS4Q9BTZ2 278 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 FUT8Q9BYC5 575 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 RBCK1Q9BYM8 510 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 FAM129AQ9BZQ8 928 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 ING2Q9H160 280 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 VPS11Q9H270 941 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 EPB41L4BQ9H329 900 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 ZNF304Q9HCX3 659 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 ENAMQ9NRM1 1142 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 ZNF358Q9NW07 568 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 GEMIN8Q9NWZ8 242 aaKnown RBP7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 HCN3Q9P1Z3 774 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 TRPC4Q9UBN4 977 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 TP53TG5Q9Y2B4 290 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 ACOT9Q9Y305 439 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 V9GYY5 206 aaPredicted RBP7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 ATRXP46100 2492 aa7.29□□□□□ -1.24
HMGB3P1-201ENST00000393368 A0A087WUV0 522 aaPredicted RBP7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 A0A087X1B8 175 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 EXOC1LA0A1B0GW35 172 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 TRBC2A0A5B9 178 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 OR2W5A6NFC9 320 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 VSTM2BA6NLU5 285 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 FOXO6A8MYZ6 492 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 TRIM49D1C9J1S8 452 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 C4orf51C9J302 202 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 TK2O00142 265 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 CCNT2O60583 730 aaKnown RBP7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 KERAO60938 352 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 RDH16O75452 317 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 JRKO75564 520 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms