RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 ACTR1AP61163 376 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 ELOA3BQ3SY89 546 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 SH3D19Q5HYK7 790 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 TOR1AIP1Q5JTV8 583 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 C6orf141Q5SZD1 244 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 TMIGD1Q6UXZ0 262 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 CYS1Q717R9 158 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 SDR16C5Q8N3Y7 309 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 ELOA3Q8NG57 546 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 KLK6Q92876 244 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 PMEPA1Q969W9 287 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 FRMD6Q96NE9 622 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 FCRL3Q96P31 734 aaPredicted RBP12.74□□□□□ -0.37
LCA5-202ENST00000392959 TMEM248Q9NWD8 314 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 GPN3Q9UHW5 284 aaPredicted RBP12.74□□□□□ -0.37
LCA5-202ENST00000392959 DUOX1Q9NRD9 1551 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 CCRL2O00421 344 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 IL12BP29460 328 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 OR3A3P47888 321 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 OR3A2P47893 321 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 EIF5AP63241 154 aaKnown RBP12.74□□□□□ -0.37
LCA5-202ENST00000392959 JAG1P78504 1218 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 ADAM15Q13444 863 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 TECRLQ5HYJ1 363 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 TXNDC8Q6A555 127 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 ZNF615Q8N8J6 731 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 CCDC107Q8WV48 283 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 TMED9Q9BVK6 235 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 OR51B5Q9H339 312 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 TAC3Q9UHF0 121 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 ST14Q9Y5Y6 855 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 RIMBP3CA6NJZ7 1639 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 RIMBP3BA6NNM3 1639 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 RIMBP3Q9UFD9 1639 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 TLX3O43711 291 aaPredicted RBP12.74□□□□□ -0.37
LCA5-202ENST00000392959 POP7O75817 140 aaKnown RBP12.74□□□□□ -0.37
LCA5-202ENST00000392959 HK1P19367 917 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 ELK4P28324 431 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 AGTR2P50052 363 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 AP2S1P53680 142 aaPredicted RBP12.74□□□□□ -0.37
LCA5-202ENST00000392959 PUM1Q14671 1186 aaKnown RBP eCLIP12.74□□□□□ -0.37
LCA5-202ENST00000392959 RAB39AQ14964 217 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 C6orf183Q5T699 404 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 Q6ZVU0 165 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 GALNT12Q8IXK2 581 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 FAM46DQ8NEK8 389 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 NDC1Q9BTX1 674 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 WDR26Q9H7D7 661 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 VRTNQ9H8Y1 702 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 CRTAC1Q9NQ79 661 aa12.74□□□□□ -0.37
LCA5-202ENST00000392959 AFDNP55196 1824 aaKnown RBP12.74□□□□□ -0.37
LCA5-202ENST00000392959 ARVCFO00192 962 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 OR1I1O60431 355 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 LEPRP48357 1165 aaKnown RBP12.73□□□□□ -0.37
LCA5-202ENST00000392959 OR12D2P58182 307 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 PRSS58Q8IYP2 241 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 TCEANCQ8N8B7 351 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 OR2L3Q8NG85 312 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 OR8J3Q8NGG0 315 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 C15orf40Q8WUR7 153 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 PHOX2BQ99453 314 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 TSSK6Q9BXA6 273 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 CNTRLQ7Z7A1 2325 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 KDELR3O43731 214 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 C7P10643 843 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 IVDP26440 423 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 MAP3K8P41279 467 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 TMEM135Q86UB9 458 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 SLC37A3Q8NCC5 494 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 COQ8BQ96D53 544 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 CLCC1Q96S66 551 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 ABCG4Q9H172 646 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 SOX17Q9H6I2 414 aaPredicted RBP12.73□□□□□ -0.37
LCA5-202ENST00000392959 ZDHHC4Q9NPG8 344 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 NLE1Q9NVX2 485 aaPredicted RBP12.73□□□□□ -0.37
LCA5-202ENST00000392959 DNAJC27Q9NZQ0 273 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 COPS7AQ9UBW8 275 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 SEC14L4Q9UDX3 406 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 MAU2Q9Y6X3 613 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 VIRMAQ69YN4 1812 aaKnown RBP12.73□□□□□ -0.37
LCA5-202ENST00000392959 GATBO75879 557 aaKnown RBP12.73□□□□□ -0.37
LCA5-202ENST00000392959 KDM4BO94953 1096 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 RAB36O95755 333 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 OAS1P00973 400 aaKnown RBP12.73□□□□□ -0.37
LCA5-202ENST00000392959 CLCNKAP51800 687 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 KCNC4Q03721 635 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 PTGR1Q14914 329 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 PCBP2Q15366 365 aaKnown RBP eCLIP12.73□□□□□ -0.37
LCA5-202ENST00000392959 MYLK3Q32MK0 819 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 TMEM145Q8NBT3 493 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 TFGQ92734 400 aaPredicted RBP12.73□□□□□ -0.37
LCA5-202ENST00000392959 TMEM80Q96HE8 168 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 FUZQ9BT04 418 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 WACQ9BTA9 647 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 BTBD1Q9H0C5 482 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 BRD7Q9NPI1 651 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 LYARQ9NX58 379 aaKnown RBP12.73□□□□□ -0.37
LCA5-202ENST00000392959 UTS2RQ9UKP6 389 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 DNAJB5O75953 348 aa12.73□□□□□ -0.37
LCA5-202ENST00000392959 PRH1P02810 166 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms