RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 SAP18O00422 153 aaKnown RBP20.27■□□□□ 0.84
COL23A1-201ENST00000390654 SELPP16109 830 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 LHCGRP22888 699 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 CD70P32970 193 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 CDH12P55289 794 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 GAB1Q13480 694 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 CDKN3Q16667 212 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 PROX2Q3B8N5 592 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 CCSMST1Q4G0I0 132 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.27■□□□□ 0.84
COL23A1-201ENST00000390654 LILRA3Q8N6C8 439 aaPredicted RBP20.27■□□□□ 0.84
COL23A1-201ENST00000390654 CENPOQ9BU64 300 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 VN1R3Q9BXE9 311 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 CWH43Q9H720 699 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 RHCGQ9UBD6 479 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 OSGIN1Q9UJX0 560 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 KCNE1BA0A087WTH5 132 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 E7EQ34 232 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 GFRA2O00451 464 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 SSX4O60224 188 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 RPLP2P05387 115 aaKnown RBP20.27■□□□□ 0.84
COL23A1-201ENST00000390654 AP1S1P61966 158 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 SREBF2Q12772 1141 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 SF3B4Q15427 424 aaKnown RBP eCLIP20.27■□□□□ 0.84
COL23A1-201ENST00000390654 PLEKHG6Q3KR16 790 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 C6orf183Q5T699 404 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 CBLL1Q75N03 491 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 OR9Q2Q8NGE9 314 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 SLC38A4Q969I6 547 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 TESCQ96BS2 214 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 NIPSNAP1Q9BPW8 284 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 CLSTN3Q9BQT9 956 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 ASIC5Q9NY37 505 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 ACSL6Q9UKU0 697 aa20.27■□□□□ 0.84
COL23A1-201ENST00000390654 TMEM202A6NGA9 273 aa20.26■□□□□ 0.83
COL23A1-201ENST00000390654 SUV39H1O43463 412 aa20.26■□□□□ 0.83
COL23A1-201ENST00000390654 CKMP06732 381 aa20.26■□□□□ 0.83
COL23A1-201ENST00000390654 ALOX5P09917 674 aa20.26■□□□□ 0.83
COL23A1-201ENST00000390654 PPP3CCP48454 512 aa20.26■□□□□ 0.83
COL23A1-201ENST00000390654 TUFMP49411 452 aaKnown RBP20.26■□□□□ 0.83
COL23A1-201ENST00000390654 PCYT1AP49585 367 aa20.26■□□□□ 0.83
COL23A1-201ENST00000390654 ACSM2AQ08AH3 577 aa20.26■□□□□ 0.83
COL23A1-201ENST00000390654 ACSM2BQ68CK6 577 aa20.26■□□□□ 0.83
COL23A1-201ENST00000390654 EIF3MQ7L2H7 374 aaKnown RBP20.26■□□□□ 0.83
COL23A1-201ENST00000390654 OR5AK3PQ8NH89 298 aa20.26■□□□□ 0.83
COL23A1-201ENST00000390654 UBTD2Q8WUN7 234 aa20.26■□□□□ 0.83
COL23A1-201ENST00000390654 GTPBP3Q969Y2 492 aaKnown RBP20.26■□□□□ 0.83
COL23A1-201ENST00000390654 ALG14Q96F25 216 aa20.26■□□□□ 0.83
COL23A1-201ENST00000390654 CEP295NLQ96MC4 621 aa20.26■□□□□ 0.83
COL23A1-201ENST00000390654 ZDHHC6Q9H6R6 413 aa20.26■□□□□ 0.83
COL23A1-201ENST00000390654 WDR70Q9NW82 654 aa20.26■□□□□ 0.83
COL23A1-201ENST00000390654 DOCK6Q96HP0 2047 aa20.26■□□□□ 0.83
COL23A1-201ENST00000390654 SCN2BO60939 215 aa20.26■□□□□ 0.83
COL23A1-201ENST00000390654 KCNK2O95069 426 aa20.26■□□□□ 0.83
COL23A1-201ENST00000390654 MADCAM1Q13477 382 aa20.26■□□□□ 0.83
COL23A1-201ENST00000390654 RETSATQ6NUM9 610 aa20.26■□□□□ 0.83
COL23A1-201ENST00000390654 C1orf52Q8N6N3 182 aaKnown RBP20.26■□□□□ 0.83
COL23A1-201ENST00000390654 ITPKCQ96DU7 683 aa20.26■□□□□ 0.83
COL23A1-201ENST00000390654 C14orf119Q9NWQ9 140 aa20.26■□□□□ 0.83
COL23A1-201ENST00000390654 YIPF1Q9Y548 306 aa20.26■□□□□ 0.83
COL23A1-201ENST00000390654 TRBV5-4A0A0C4DH59 114 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 GNG14A0A1W2PPG7 69 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 TNFRSF11BO00300 401 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 SNPHO15079 494 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 PTHP01270 115 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 C9P02748 559 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 PRPS1L1P21108 318 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 POU1F1P28069 291 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 PTSQ03393 145 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 GANABQ14697 944 aaKnown RBP20.25■□□□□ 0.83
COL23A1-201ENST00000390654 COX20Q5RI15 118 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 FAM124AQ86V42 546 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 CAPSLQ8WWF8 208 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 GGHQ92820 318 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 KCNS3Q9BQ31 491 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 DUSP26Q9BV47 211 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 C2orf49Q9BVC5 232 aaPredicted RBP20.25■□□□□ 0.83
COL23A1-201ENST00000390654 RDH14Q9HBH5 336 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 DNAJC11Q9NVH1 559 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 AP3M1Q9Y2T2 418 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.25■□□□□ 0.83
COL23A1-201ENST00000390654 GABRR3A8MPY1 467 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 UPK1BO75841 260 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 ETFAP13804 333 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 IER5LQ5T953 404 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 ATAD3BQ5T9A4 648 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 DNAJB7Q7Z6W7 309 aaPredicted RBP20.25■□□□□ 0.83
COL23A1-201ENST00000390654 NPAS4Q8IUM7 802 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 GABARAPL1Q9H0R8 117 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 OGDHLQ9ULD0 1010 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 CYP7B1O75881 506 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 MAPK1P28482 360 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 CTSKP43235 329 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 CXCR4P61073 352 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 KCNJ10P78508 379 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 TPRG1LQ5T0D9 272 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 DESI1Q6ICB0 168 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 STX19Q8N4C7 294 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 C7orf34Q96L11 122 aa20.25■□□□□ 0.83
COL23A1-201ENST00000390654 ZDHHC3Q9NYG2 299 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms