RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 ZNF81P51508 661 aa13.83□□□□□ -0.19
RTF1-201ENST00000389629 ADPRMQ3LIE5 342 aa13.83□□□□□ -0.19
RTF1-201ENST00000389629 ATP13A5Q4VNC0 1218 aa13.83□□□□□ -0.19
RTF1-201ENST00000389629 KDELC1Q6UW63 502 aa13.83□□□□□ -0.19
RTF1-201ENST00000389629 BTLAQ7Z6A9 289 aa13.83□□□□□ -0.19
RTF1-201ENST00000389629 C2orf73Q8N5S3 287 aaPredicted RBP13.83□□□□□ -0.19
RTF1-201ENST00000389629 PGAP3Q96FM1 320 aaPredicted RBP13.83□□□□□ -0.19
RTF1-201ENST00000389629 DHRS1Q96LJ7 313 aa13.83□□□□□ -0.19
RTF1-201ENST00000389629 UCK2Q9BZX2 261 aa13.83□□□□□ -0.19
RTF1-201ENST00000389629 LAMB2P55268 1798 aa13.83□□□□□ -0.19
RTF1-201ENST00000389629 PRAMEF11O60813 436 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 ERAL1O75616 437 aaKnown RBP13.83□□□□□ -0.2
RTF1-201ENST00000389629 RLN1P04808 185 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 FHP07954 510 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 INAVAQ3KP66 663 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 LRRC66Q68CR7 880 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 CDK20Q8IZL9 346 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 KCNJ9Q92806 393 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 GPR78Q96P69 363 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.83□□□□□ -0.2
RTF1-201ENST00000389629 NLKQ9UBE8 527 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 NCKAP1Q9Y2A7 1128 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 A0A1B0GVM2 712 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 SAP18O00422 153 aaKnown RBP13.83□□□□□ -0.2
RTF1-201ENST00000389629 CAPN15O75808 1086 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 PRPS1L1P21108 318 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 KDELR2P33947 212 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 CDKN1CP49918 316 aaPredicted RBP13.83□□□□□ -0.2
RTF1-201ENST00000389629 MAZP56270 477 aaKnown RBP13.83□□□□□ -0.2
RTF1-201ENST00000389629 PLA2G4EQ3MJ16 856 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 MAMDC4Q6UXC1 1216 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 TSPYL5Q86VY4 417 aaPredicted RBP13.83□□□□□ -0.2
RTF1-201ENST00000389629 TRAPPC5Q8IUR0 188 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 FEVQ99581 238 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 TMED9Q9BVK6 235 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 TNFRSF12AQ9NP84 129 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 RAD18Q9NS91 495 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 TLX2O43763 284 aaPredicted RBP13.83□□□□□ -0.2
RTF1-201ENST00000389629 SULT1C4O75897 302 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 IFNA7P01567 189 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 S100A9P06702 114 aaKnown RBP13.83□□□□□ -0.2
RTF1-201ENST00000389629 ATF6P18850 670 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 EPHB3P54753 998 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.83□□□□□ -0.2
RTF1-201ENST00000389629 LETMD1Q6P1Q0 360 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 PAQR9Q6ZVX9 377 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 BEND5Q7L4P6 421 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 NOXA1Q86UR1 476 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 MARCH9Q86YJ5 346 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 OR7G1Q8NGA0 311 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 ZBED3Q96IU2 234 aaPredicted RBP13.83□□□□□ -0.2
RTF1-201ENST00000389629 ZNF607Q96SK3 696 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 FLRT1Q9NZU1 646 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 GULP1Q9UBP9 304 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 CD84Q9UIB8 345 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 CDH7Q9ULB5 785 aa13.83□□□□□ -0.2
RTF1-201ENST00000389629 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.82□□□□□ -0.2
RTF1-201ENST00000389629 EPOP01588 193 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 PIGAP37287 484 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 SNRPD1P62314 119 aaKnown RBP13.82□□□□□ -0.2
RTF1-201ENST00000389629 ZBTB6Q15916 424 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 ATAD3CQ5T2N8 411 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 NRARPQ7Z6K4 114 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 B3GNT8Q7Z7M8 397 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 UBXN10Q96LJ8 280 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 TAS2R7Q9NYW3 318 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 PCDHA9Q9Y5H5 950 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 MID1O15344 667 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 TOXO94900 526 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 SBK3P0C264 359 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 ASMTP46597 345 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 XKP51811 444 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 GRSF1Q12849 480 aaKnown RBP eCLIP13.82□□□□□ -0.2
RTF1-201ENST00000389629 SCARB2Q14108 478 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 DUOXA1Q1HG43 343 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 FAM219BQ5XKK7 198 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 ZNF598Q86UK7 904 aaKnown RBP13.82□□□□□ -0.2
RTF1-201ENST00000389629 OR10T2Q8NGX3 314 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 SLC2A11Q9BYW1 496 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 OR6C75A6NL08 312 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 HAS3O00219 553 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 SSTR4P31391 388 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 CREMQ03060 361 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 TCEANCQ8N8B7 351 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 PPIL3Q9H2H8 161 aaKnown RBP13.82□□□□□ -0.2
RTF1-201ENST00000389629 GKN1Q9NS71 199 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 BCKDHAP12694 445 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 PFKLP17858 780 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 OR1D2P34982 312 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 MAP2K3P46734 347 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 ZNF792Q3KQV3 632 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 CLEC12AQ5QGZ9 265 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 ZSWIM9Q86XI8 627 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 COL26A1Q96A83 441 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 ACOT13Q9NPJ3 140 aa13.82□□□□□ -0.2
RTF1-201ENST00000389629 OR2AG2A6NM03 316 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 F2P00734 622 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 MAPK8P45983 427 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 TAS2R41P59536 307 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 ATG9BQ674R7 924 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms