RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 PAPPAQ13219 1627 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 PSMD9O00233 223 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 AURKAO14965 403 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 CLUP10909 449 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 SMSP52788 366 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 ZNF45Q02386 682 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 EIF2S3LQ2VIR3 472 aaKnown RBP13.59□□□□□ -0.23
SNPH-201ENST00000381867 BTBD16Q32M84 506 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 ZNF676Q8N7Q3 588 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 DRAXINQ8NBI3 349 aaPredicted RBP13.59□□□□□ -0.23
SNPH-201ENST00000381867 CREB3L1Q96BA8 519 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 PTPN18Q99952 460 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 MKKSQ9NPJ1 570 aaPredicted RBP13.59□□□□□ -0.23
SNPH-201ENST00000381867 ARL6IP5O75915 188 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 SLITRK5O94991 958 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 H1F0P07305 194 aaKnown RBP13.59□□□□□ -0.23
SNPH-201ENST00000381867 HNRNPA1P09651 372 aaKnown RBP eCLIP13.59□□□□□ -0.23
SNPH-201ENST00000381867 ZNF3P17036 446 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 RASGEF1BQ0VAM2 473 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 USF2Q15853 346 aaPredicted RBP13.59□□□□□ -0.23
SNPH-201ENST00000381867 PYURFQ96I23 114 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 SLC35A5Q9BS91 424 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 MMP27Q9H306 513 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 TRIM36Q9NQ86 728 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 LYARQ9NX58 379 aaKnown RBP13.59□□□□□ -0.23
SNPH-201ENST00000381867 M0R036 132 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 GMFGO60234 142 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 DLX3O60479 287 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 ECI2O75521 394 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 GSTT2P0CG29 244 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 LCN1P31025 176 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 MAP3K8P41279 467 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 GPX6P59796 221 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 CIR1Q86X95 450 aaPredicted RBP13.59□□□□□ -0.23
SNPH-201ENST00000381867 CPNE8Q86YQ8 564 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 GHDCQ8N2G8 530 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 STOML3Q8TAV4 291 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 LMLNQ96KR4 655 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 CDK15Q96Q40 435 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 MTERF1Q99551 399 aaKnown RBP13.59□□□□□ -0.23
SNPH-201ENST00000381867 XKR8Q9H6D3 395 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 CTPS2Q9NRF8 586 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 AJAP1Q9UKB5 411 aaPredicted RBP13.59□□□□□ -0.23
SNPH-201ENST00000381867 MAB21L2Q9Y586 359 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 PCDHGB6Q9Y5F9 930 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 FGF18O76093 207 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 IQCF3P0C7M6 154 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 EPCAMP16422 314 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 NPR2P20594 1047 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 FUT4P22083 530 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 SLC9A3P48764 834 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 PRPF38BQ5VTL8 546 aaKnown RBP13.59□□□□□ -0.23
SNPH-201ENST00000381867 SLC2A7Q6PXP3 512 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 ARL9Q6T311 187 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 VITQ6UXI7 678 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 ZNF366Q8N895 744 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 ASCC1Q8N9N2 400 aaKnown RBP13.59□□□□□ -0.23
SNPH-201ENST00000381867 AKAP1Q92667 903 aaKnown RBP eCLIP13.59□□□□□ -0.234e-6■■■■□ 26.4
SNPH-201ENST00000381867 TRIM43Q96BQ3 446 aaPredicted RBP13.59□□□□□ -0.23
SNPH-201ENST00000381867 WACQ9BTA9 647 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 UCK2Q9BZX2 261 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 ZNF350Q9GZX5 532 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 CDH7Q9ULB5 785 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 ARL5AQ9Y689 179 aa13.59□□□□□ -0.23
SNPH-201ENST00000381867 TOGARAM1Q9Y4F4 1720 aa13.58□□□□□ -0.23
SNPH-201ENST00000381867 TMEM233B4DJY2 109 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 H7C2Y5 167 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 SLC31A1O15431 190 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 FAM189A1O60320 539 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 ALPPL2P10696 532 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 MAT2AP31153 395 aaKnown RBP13.58□□□□□ -0.24
SNPH-201ENST00000381867 GRIA1P42261 906 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 AVPR1BP47901 424 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 NCEH1Q6PIU2 408 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 SLC39A5Q6ZMH5 540 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 IQCHQ86VS3 1027 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 NATD1Q8N6N6 113 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 CMASQ8NFW8 434 aaPredicted RBP13.58□□□□□ -0.24
SNPH-201ENST00000381867 COQ8BQ96D53 544 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 MIPEPQ99797 713 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 TMED9Q9BVK6 235 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 CUEDC1Q9NWM3 386 aaPredicted RBP13.58□□□□□ -0.24
SNPH-201ENST00000381867 SEC14L4Q9UDX3 406 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 INSL5Q9Y5Q6 135 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 ABCA3Q99758 1704 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 GNAO1P09471 354 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 SYN1P17600 705 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 RPS3P23396 243 aaKnown RBP eCLIP13.58□□□□□ -0.24
SNPH-201ENST00000381867 MASP1P48740 699 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 PUM1Q14671 1186 aaKnown RBP eCLIP13.58□□□□□ -0.24
SNPH-201ENST00000381867 CLEC12AQ5QGZ9 265 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 OGFRL1Q5TC84 451 aaPredicted RBP13.58□□□□□ -0.24
SNPH-201ENST00000381867 PAQR3Q6TCH7 311 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 SETD6Q8TBK2 473 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 SH3RF2Q8TEC5 729 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 CLDND1Q9NY35 253 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 FBXO9Q9UK97 447 aaPredicted RBP13.58□□□□□ -0.24
SNPH-201ENST00000381867 SIX3O95343 332 aaPredicted RBP13.58□□□□□ -0.24
SNPH-201ENST00000381867 SP140Q13342 867 aa13.58□□□□□ -0.24
SNPH-201ENST00000381867 DUOXA1Q1HG43 343 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms