RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 LAX1Q8IWV1 398 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 MSRB3Q8IXL7 192 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 DACT3Q96B18 629 aaPredicted RBP13.42□□□□□ -0.26
SDC1-202ENST00000381150 MTERF3Q96E29 417 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 HSH2DQ96JZ2 352 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 PANX1Q96RD7 426 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 DERL2Q9GZP9 239 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 LRTM1Q9HBL6 345 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 MKLN1Q9UL63 735 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 A0A0D9SEW6 157 aa13.41□□□□□ -0.26
SDC1-202ENST00000381150 ERN1O75460 977 aaKnown RBP13.41□□□□□ -0.26
SDC1-202ENST00000381150 SEMA3DO95025 777 aa13.41□□□□□ -0.26
SDC1-202ENST00000381150 EPOP01588 193 aa13.41□□□□□ -0.26
SDC1-202ENST00000381150 PKMP14618 531 aaKnown RBP13.41□□□□□ -0.26
SDC1-202ENST00000381150 CYP2A7P20853 494 aa13.41□□□□□ -0.26
SDC1-202ENST00000381150 TACR2P21452 398 aa13.41□□□□□ -0.26
SDC1-202ENST00000381150 RRM2P31350 389 aa13.41□□□□□ -0.26
SDC1-202ENST00000381150 DNAJA1P31689 397 aaKnown RBP13.41□□□□□ -0.26
SDC1-202ENST00000381150 MC4RP32245 332 aa13.41□□□□□ -0.26
SDC1-202ENST00000381150 GNPDA1P46926 289 aa13.41□□□□□ -0.26
SDC1-202ENST00000381150 SLC14A1Q13336 389 aa13.41□□□□□ -0.26
SDC1-202ENST00000381150 PYDC2Q56P42 97 aa13.41□□□□□ -0.26
SDC1-202ENST00000381150 PTRHD1Q6GMV3 140 aaKnown RBP13.41□□□□□ -0.26
SDC1-202ENST00000381150 NLRP8Q86W28 1048 aa13.41□□□□□ -0.26
SDC1-202ENST00000381150 ST13P5Q8NFI4 369 aaPredicted RBP13.41□□□□□ -0.26
SDC1-202ENST00000381150 BCL7CQ8WUZ0 217 aaPredicted RBP13.41□□□□□ -0.26
SDC1-202ENST00000381150 IL4I1Q96RQ9 567 aa13.41□□□□□ -0.26
SDC1-202ENST00000381150 TRIB3Q96RU7 358 aa13.41□□□□□ -0.26
SDC1-202ENST00000381150 UCKL1Q9NWZ5 548 aa13.41□□□□□ -0.26
SDC1-202ENST00000381150 GPRC5BQ9NZH0 403 aa13.41□□□□□ -0.26
SDC1-202ENST00000381150 H3BNC9 293 aa13.41□□□□□ -0.26
SDC1-202ENST00000381150 WWP2O00308 870 aa13.41□□□□□ -0.26
SDC1-202ENST00000381150 HOXD9P28356 352 aaPredicted RBP13.41□□□□□ -0.26
SDC1-202ENST00000381150 UGT2B15P54855 530 aa13.41□□□□□ -0.26
SDC1-202ENST00000381150 ALDH6A1Q02252 535 aaKnown RBP13.41□□□□□ -0.26
SDC1-202ENST00000381150 BTBD16Q32M84 506 aa13.41□□□□□ -0.26
SDC1-202ENST00000381150 FUT10Q6P4F1 479 aa13.41□□□□□ -0.26
SDC1-202ENST00000381150 TSPYL5Q86VY4 417 aaPredicted RBP13.41□□□□□ -0.26
SDC1-202ENST00000381150 NKAPQ8N5F7 415 aaKnown RBP13.41□□□□□ -0.26
SDC1-202ENST00000381150 CLDN19Q8N6F1 224 aa13.41□□□□□ -0.26
SDC1-202ENST00000381150 GPR150Q8NGU9 434 aa13.41□□□□□ -0.26
SDC1-202ENST00000381150 MAL2Q969L2 176 aa13.41□□□□□ -0.26
SDC1-202ENST00000381150 COQ8BQ96D53 544 aa13.41□□□□□ -0.26
SDC1-202ENST00000381150 PPP3R2Q96LZ3 170 aa13.41□□□□□ -0.26
SDC1-202ENST00000381150 SEPT5Q99719 369 aaPredicted RBP13.41□□□□□ -0.26
SDC1-202ENST00000381150 TTLL2Q9BWV7 592 aa13.41□□□□□ -0.26
SDC1-202ENST00000381150 NT5C1B-RDH14C9J2C7 533 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 GFRA2O00451 464 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 SLITRK5O94991 958 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 EFEMP2O95967 443 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 SERPINF2P08697 491 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 PRR35P0CG20 571 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 SOX3P41225 446 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 TWF1Q12792 350 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 SUSD1Q6UWL2 747 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 HOMEZQ8IX15 550 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 RGL4Q8IZJ4 473 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 OR8H1Q8NGG4 311 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 PHF21AQ96BD5 680 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 APOLD1Q96LR9 279 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 VPS35Q96QK1 796 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 POLR1EQ9GZS1 481 aaKnown RBP13.4□□□□□ -0.26
SDC1-202ENST00000381150 MS4A12Q9NXJ0 267 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 SAMD4AQ9UPU9 718 aaKnown RBP13.4□□□□□ -0.26
SDC1-202ENST00000381150 NAALAD2Q9Y3Q0 740 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 MKI67P46013 3256 aaKnown RBP13.4□□□□□ -0.26
SDC1-202ENST00000381150 H3BQ06 376 aaPredicted RBP13.4□□□□□ -0.26
SDC1-202ENST00000381150 NOS1APO75052 506 aaPredicted RBP13.4□□□□□ -0.26
SDC1-202ENST00000381150 NPPAP01160 153 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 PSKH1P11801 424 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 IL7P13232 177 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 SELPP16109 830 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 INPP1P49441 399 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 RGS6P49758 472 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 PROX2Q3B8N5 592 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 USP39Q53GS9 565 aaKnown RBP13.4□□□□□ -0.26
SDC1-202ENST00000381150 PXDC1Q5TGL8 231 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 DPY19L3Q6ZPD9 716 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 GPR149Q86SP6 731 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 TIGD4Q8IY51 512 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 RNF175Q8N4F7 328 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 GRPEL2Q8TAA5 225 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 GGHQ92820 318 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 PEX13Q92968 403 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 DIRAS2Q96HU8 199 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 FEVQ99581 238 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 CCM2Q9BSQ5 444 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 SPASTQ9UBP0 616 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 TBC1D24Q9ULP9 559 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 PCDHB7Q9Y5E2 793 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 PCDHGB1Q9Y5G3 927 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 STX7O15400 261 aaKnown RBP13.4□□□□□ -0.26
SDC1-202ENST00000381150 ADAM12O43184 909 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 AOC2O75106 756 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 GALTP07902 379 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 GRIK2Q13002 908 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 SF1Q15637 639 aaKnown RBP13.4□□□□□ -0.26
SDC1-202ENST00000381150 KLHL17Q6TDP4 642 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 FAM20CQ8IXL6 584 aa13.4□□□□□ -0.26
SDC1-202ENST00000381150 BHMTQ93088 406 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms