RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 LCN9Q8WX39 176 aa16.86■□□□□ 0.29
LYSMD4-203ENST00000378904 CCDC124Q96CT7 223 aaKnown RBP16.86■□□□□ 0.29
LYSMD4-203ENST00000378904 TSSK3Q96PN8 268 aa16.86■□□□□ 0.29
LYSMD4-203ENST00000378904 SLC39A3Q9BRY0 314 aa16.86■□□□□ 0.29
LYSMD4-203ENST00000378904 IER2Q9BTL4 223 aa16.86■□□□□ 0.29
LYSMD4-203ENST00000378904 MIR1-1HGQ9H1L0 117 aa16.86■□□□□ 0.29
LYSMD4-203ENST00000378904 IL1RL2Q9HB29 575 aa16.86■□□□□ 0.29
LYSMD4-203ENST00000378904 RUVBL1Q9Y265 456 aaKnown RBP16.86■□□□□ 0.29
LYSMD4-203ENST00000378904 TGFB1P01137 390 aa16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 PEBP1P30086 187 aaKnown RBP16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 PIK3CBP42338 1070 aa16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 DGKQP52824 942 aa16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 CLDN8P56748 225 aa16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 RACK1P63244 317 aaKnown RBP16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 PHEXP78562 749 aa16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 DMWDQ09019 674 aa16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 RIPOR1Q6ZS17 1223 aa16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 TAF8Q7Z7C8 310 aa16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 FAM9CQ8IZT9 166 aa16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 C1orf52Q8N6N3 182 aaKnown RBP16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 OR4E2Q8NGC2 313 aa16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 C11orf24Q96F05 449 aaPredicted RBP16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 NR1H4Q96RI1 486 aaPredicted RBP16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 ZNF184Q99676 751 aaPredicted RBP16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 CLMPQ9H6B4 373 aa16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 GID8Q9NWU2 228 aa16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 SPHK1Q9NYA1 384 aa16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 MAP3K7O43318 606 aa16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 JUNDP17535 347 aa16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 REEP5Q00765 189 aa16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 C1orf61Q13536 156 aa16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 CEACAM7Q14002 265 aa16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 SF1Q15637 639 aaKnown RBP16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 SPIN4Q56A73 249 aa16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 VN1R5Q7Z5H4 357 aa16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 CHTF18Q8WVB6 975 aa16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 PATE1Q8WXA2 126 aa16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 FAM192AQ9GZU8 254 aa16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 SPAG4Q9NPE6 437 aa16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 ADA2Q9NZK5 511 aa16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 OR6C2Q9NZP2 312 aa16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 PDP2Q9P2J9 529 aa16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 APOBEC3BQ9UH17 382 aaKnown RBP16.85■□□□□ 0.29
LYSMD4-203ENST00000378904 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 IGKV1-8A0A0C4DH67 115 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 FEZF1A0PJY2 475 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 FXYD1O00168 92 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 MYO1DO94832 1006 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 PDGFBP01127 241 aaPredicted RBP16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 PCSK2P16519 638 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 CSNK1G2P78368 415 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 NFYCQ13952 458 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 ZNF423Q2M1K9 1284 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 FAM174BQ3ZCQ3 159 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 PRRT3Q5FWE3 981 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 SLC2A7Q6PXP3 512 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 IQCHQ86VS3 1027 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 TRIM48Q8IWZ4 208 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 FAM20CQ8IXL6 584 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 TMEFF1Q8IYR6 380 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 RNF148Q8N7C7 305 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 GPR156Q8NFN8 814 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 STMN2Q93045 179 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 LRRC58Q96CX6 371 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 EGLN2Q96KS0 407 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 HOPXQ9BPY8 73 aaPredicted RBP16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 GPATCH1Q9BRR8 931 aaKnown RBP16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 OR51B5Q9H339 312 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 TM9SF3Q9HD45 589 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 MRPS30Q9NP92 439 aaKnown RBP16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 POMPQ9Y244 141 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 CHRM5P08912 532 aaPredicted RBP16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 XRCC1P18887 633 aaPredicted RBP16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 RPS6KA3P51812 740 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 ACTR3P61158 418 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 RAE1P78406 368 aaKnown RBP16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 SPANXN4Q5MJ08 99 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 ADCK2Q7Z695 626 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 MINDY1Q8N5J2 469 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 ANKRD53Q8N9V6 530 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 LRRC61Q9BV99 259 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 PITHD1Q9GZP4 211 aaPredicted RBP16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 RHBGQ9H310 441 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 SRMSQ9H3Y6 488 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 NT5DC2Q9H857 520 aa16.84■□□□□ 0.29
LYSMD4-203ENST00000378904 TP53BP1Q12888 1972 aaPredicted RBP16.83■□□□□ 0.29
LYSMD4-203ENST00000378904 CROCCQ5TZA2 2017 aa16.83■□□□□ 0.29
LYSMD4-203ENST00000378904 ANKDD1BA6NHY2 528 aa16.83■□□□□ 0.28
LYSMD4-203ENST00000378904 ISM1B1AKI9 464 aa16.83■□□□□ 0.28
LYSMD4-203ENST00000378904 TLR4O00206 839 aa16.83■□□□□ 0.28
LYSMD4-203ENST00000378904 VIPP01282 170 aa16.83■□□□□ 0.28
LYSMD4-203ENST00000378904 IL6P05231 212 aa16.83■□□□□ 0.28
LYSMD4-203ENST00000378904 ABATP80404 500 aa16.83■□□□□ 0.28
LYSMD4-203ENST00000378904 CAPRIN1Q14444 709 aaKnown RBP16.83■□□□□ 0.28
LYSMD4-203ENST00000378904 PLCL1Q15111 1095 aa16.83■□□□□ 0.28
LYSMD4-203ENST00000378904 MAMSTRQ6ZN01 415 aa16.83■□□□□ 0.28
LYSMD4-203ENST00000378904 SYT12Q8IV01 421 aa16.83■□□□□ 0.28
LYSMD4-203ENST00000378904 SFTPA2Q8IWL1 248 aa16.83■□□□□ 0.28
LYSMD4-203ENST00000378904 NAGSQ8N159 534 aa16.83■□□□□ 0.28
LYSMD4-203ENST00000378904 OR2L3Q8NG85 312 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms