RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 UTP20O75691 2785 aaKnown RBP17.99■□□□□ 0.47
TMEM88B-201ENST00000378821 ATXN8OSP0DMR3 200 aa17.99■□□□□ 0.47
TMEM88B-201ENST00000378821 IMPA1P29218 277 aa17.99■□□□□ 0.47
TMEM88B-201ENST00000378821 SLC26A3P40879 764 aa17.99■□□□□ 0.47
TMEM88B-201ENST00000378821 PHKG1Q16816 387 aa17.99■□□□□ 0.47
TMEM88B-201ENST00000378821 TUBB8Q3ZCM7 444 aa17.99■□□□□ 0.47
TMEM88B-201ENST00000378821 MBOAT1Q6ZNC8 495 aa17.99■□□□□ 0.47
TMEM88B-201ENST00000378821 IQCKQ8N0W5 287 aa17.99■□□□□ 0.47
TMEM88B-201ENST00000378821 ZADH2Q8N4Q0 377 aa17.99■□□□□ 0.47
TMEM88B-201ENST00000378821 METTL27Q8N6F8 245 aaPredicted RBP17.99■□□□□ 0.47
TMEM88B-201ENST00000378821 TGIF2Q9GZN2 237 aa17.99■□□□□ 0.47
TMEM88B-201ENST00000378821 CAB39LQ9H9S4 337 aa17.99■□□□□ 0.47
TMEM88B-201ENST00000378821 CDC14AQ9UNH5 594 aa17.99■□□□□ 0.47
TMEM88B-201ENST00000378821 ESPL1Q14674 2120 aa17.99■□□□□ 0.47
TMEM88B-201ENST00000378821 TXNDC9O14530 226 aa17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 SLC16A5O15375 505 aa17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 WISP3O95389 354 aaPredicted RBP17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 EIF2S1P05198 315 aaKnown RBP17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 POU4F1Q01851 419 aa17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 OCA2Q04671 838 aa17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 Q0VFX4 171 aa17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 ILF2Q12905 390 aaKnown RBP17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 NAB1Q13506 487 aa17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 TSTA3Q13630 321 aaPredicted RBP17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 DSG2Q14126 1118 aa17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 FHL5Q5TD97 284 aa17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 SHISA6Q6ZSJ9 500 aa17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 IFT20Q8IY31 132 aa17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 CSNK1A1LQ8N752 337 aa17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 AMER3Q8N944 861 aa17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 PPP4R1Q8TF05 950 aa17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 MIEF2Q96C03 454 aa17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 C19orf60Q96EN9 201 aa17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 CRB3Q9BUF7 120 aa17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 LHPPQ9H008 270 aa17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 TSPYL1Q9H0U9 437 aa17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 PARVBQ9HBI1 364 aa17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 POPDC3Q9HBV1 291 aa17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 CUEDC1Q9NWM3 386 aaPredicted RBP17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 STOX2Q9P2F5 926 aaPredicted RBP17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 NFU1Q9UMS0 254 aa17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 RUVBL1Q9Y265 456 aaKnown RBP17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 PCDHGA10Q9Y5H3 936 aa17.98■□□□□ 0.47
TMEM88B-201ENST00000378821 RP1L1Q8IWN7 2480 aaPredicted RBP17.97■□□□□ 0.47
TMEM88B-201ENST00000378821 KCNE1BA0A087WTH5 132 aa17.97■□□□□ 0.47
TMEM88B-201ENST00000378821 FOXS1O43638 330 aa17.97■□□□□ 0.47
TMEM88B-201ENST00000378821 ZNF500O60304 480 aaPredicted RBP17.97■□□□□ 0.47
TMEM88B-201ENST00000378821 CBX6O95503 412 aa17.97■□□□□ 0.47
TMEM88B-201ENST00000378821 ACSL3O95573 720 aa17.97■□□□□ 0.47
TMEM88B-201ENST00000378821 HPP00738 406 aa17.97■□□□□ 0.47
TMEM88B-201ENST00000378821 HRH2P25021 359 aa17.97■□□□□ 0.47
TMEM88B-201ENST00000378821 ITGA3P26006 1051 aa17.97■□□□□ 0.47
TMEM88B-201ENST00000378821 SLC12A2P55011 1212 aa17.97■□□□□ 0.47
TMEM88B-201ENST00000378821 FAM53BQ14153 422 aa17.97■□□□□ 0.47
TMEM88B-201ENST00000378821 USP10Q14694 798 aaKnown RBP17.97■□□□□ 0.47
TMEM88B-201ENST00000378821 RBBP7Q16576 425 aa17.97■□□□□ 0.47
TMEM88B-201ENST00000378821 HKDC1Q2TB90 917 aa17.97■□□□□ 0.47
TMEM88B-201ENST00000378821 GRTP1Q5TC63 336 aa17.97■□□□□ 0.47
TMEM88B-201ENST00000378821 AGAP7PQ5VUJ5 663 aa17.97■□□□□ 0.47
TMEM88B-201ENST00000378821 CUZD1Q86UP6 607 aa17.97■□□□□ 0.47
TMEM88B-201ENST00000378821 LAPTM4BQ86VI4 370 aa17.97■□□□□ 0.47
TMEM88B-201ENST00000378821 MCOLN3Q8TDD5 553 aa17.97■□□□□ 0.47
TMEM88B-201ENST00000378821 ANKRD49Q8WVL7 239 aa17.97■□□□□ 0.47
TMEM88B-201ENST00000378821 PDLIM5Q96HC4 596 aaKnown RBP17.97■□□□□ 0.47
TMEM88B-201ENST00000378821 CABS1Q96KC9 395 aa17.97■□□□□ 0.47
TMEM88B-201ENST00000378821 AGAP4Q96P64 663 aa17.97■□□□□ 0.47
TMEM88B-201ENST00000378821 SLC29A3Q9BZD2 475 aa17.97■□□□□ 0.47
TMEM88B-201ENST00000378821 GPAMQ9HCL2 828 aa17.97■□□□□ 0.47
TMEM88B-201ENST00000378821 TMEM184CQ9NVA4 438 aa17.97■□□□□ 0.47
TMEM88B-201ENST00000378821 BLACEA4D250 179 aa17.96■□□□□ 0.47
TMEM88B-201ENST00000378821 NPEPPSL1A6NEC2 478 aa17.96■□□□□ 0.47
TMEM88B-201ENST00000378821 PCDH17O14917 1159 aa17.96■□□□□ 0.47
TMEM88B-201ENST00000378821 PRPF4O43172 522 aaKnown RBP eCLIP17.96■□□□□ 0.473e-7■■■■□ 24.7
TMEM88B-201ENST00000378821 PHGDHO43175 533 aaKnown RBP17.96■□□□□ 0.47
TMEM88B-201ENST00000378821 ALOX12BO75342 701 aa17.96■□□□□ 0.47
TMEM88B-201ENST00000378821 FBLP22087 321 aaKnown RBP17.96■□□□□ 0.47
TMEM88B-201ENST00000378821 PHBP35232 272 aa17.96■□□□□ 0.47
TMEM88B-201ENST00000378821 SPRP35270 261 aaPredicted RBP17.96■□□□□ 0.47
TMEM88B-201ENST00000378821 VWA2Q5GFL6 755 aa17.96■□□□□ 0.47
TMEM88B-201ENST00000378821 TEX35Q5T0J7 233 aa17.96■□□□□ 0.47
TMEM88B-201ENST00000378821 SBSNQ6UWP8 590 aa17.96■□□□□ 0.47
TMEM88B-201ENST00000378821 NKAPQ8N5F7 415 aaKnown RBP17.96■□□□□ 0.47
TMEM88B-201ENST00000378821 RERGQ96A58 199 aaPredicted RBP17.96■□□□□ 0.47
TMEM88B-201ENST00000378821 TSPAN17Q96FV3 270 aa17.96■□□□□ 0.47
TMEM88B-201ENST00000378821 CCDC138Q96M89 665 aa17.96■□□□□ 0.47
TMEM88B-201ENST00000378821 LMF1Q96S06 567 aa17.96■□□□□ 0.47
TMEM88B-201ENST00000378821 WDR77Q9BQA1 342 aaPredicted RBP17.96■□□□□ 0.47
TMEM88B-201ENST00000378821 MESP1Q9BRJ9 268 aa17.96■□□□□ 0.47
TMEM88B-201ENST00000378821 FUT8Q9BYC5 575 aa17.96■□□□□ 0.47
TMEM88B-201ENST00000378821 ACSS3Q9H6R3 686 aa17.96■□□□□ 0.47
TMEM88B-201ENST00000378821 ABCF3Q9NUQ8 709 aa17.96■□□□□ 0.47
TMEM88B-201ENST00000378821 C14orf105Q9NVL8 296 aa17.96■□□□□ 0.47
TMEM88B-201ENST00000378821 ASF1BQ9NVP2 202 aa17.96■□□□□ 0.47
TMEM88B-201ENST00000378821 C3orf18Q9UK00 162 aa17.96■□□□□ 0.47
TMEM88B-201ENST00000378821 NAV2Q8IVL1 2488 aa17.95■□□□□ 0.46
TMEM88B-201ENST00000378821 CDC7O00311 574 aa17.95■□□□□ 0.46
TMEM88B-201ENST00000378821 HAT1O14929 419 aa17.95■□□□□ 0.46
TMEM88B-201ENST00000378821 SEMA7AO75326 666 aa17.95■□□□□ 0.46
TMEM88B-201ENST00000378821 ACPPP15309 386 aa17.95■□□□□ 0.46
TMEM88B-201ENST00000378821 TBPL1P62380 186 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms