RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 FGF4P08620 206 aa13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 JUPP14923 745 aa13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 CSNK2A2P19784 350 aaPredicted RBP13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 UGT2B15P54855 530 aa13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 PCBP2Q15366 365 aaKnown RBP eCLIP13.72□□□□□ -0.212e-8■■■□□ 14.6
SHROOM1-203ENST00000378679 DUOXA1Q1HG43 343 aa13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 EGFLAMQ63HQ2 1017 aa13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 XKR5Q6UX68 686 aa13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 ARMC8Q8IUR7 673 aa13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 DRAXINQ8NBI3 349 aaPredicted RBP13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 PKP2Q99959 881 aa13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 RBM4BQ9BQ04 359 aaKnown RBP13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 RBM4Q9BWF3 364 aaKnown RBP13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 GPR174Q9BXC1 333 aa13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 B3GALT2O43825 422 aa13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 DFNA5O60443 496 aa13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 OPN1SWP03999 348 aa13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 CD72P21854 359 aa13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 HOXA9P31269 272 aa13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 ST13P50502 369 aaKnown RBP13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 NCBP2P52298 156 aaKnown RBP eCLIP13.72□□□□□ -0.213e-6■■□□□ 12.6
SHROOM1-203ENST00000378679 BROXQ5VW32 411 aa13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 DTD2Q96FN9 168 aa13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 TEFMQ96QE5 360 aaKnown RBP13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 C17orf62Q9BQA9 187 aa13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 YIPF4Q9BSR8 244 aa13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 CCDC159P0C7I6 412 aa13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 POLR2CP19387 275 aaPredicted RBP13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 CDH12P55289 794 aa13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 TAS2R41P59536 307 aa13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 ZNF763Q0D2J5 394 aa13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 DPPA4Q7L190 304 aa13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 ZSWIM3Q96MP5 696 aa13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 FAM120CQ9NX05 1096 aaKnown RBP13.72□□□□□ -0.21
SHROOM1-203ENST00000378679 TPD52L2O43399 206 aaKnown RBP13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 CLIC3O95833 236 aa13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 PENKP01210 267 aaPredicted RBP13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 RPS17P08708 135 aaKnown RBP13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 MPIP34949 423 aa13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 RGS8P57771 180 aaPredicted RBP13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 ABHD18Q0P651 414 aa13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 CTSL3PQ5NE16 218 aa13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 BLOC1S3Q6QNY0 202 aa13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 ZFAND4Q86XD8 727 aa13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 SLC15A3Q8IY34 581 aa13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 FOXJ1Q92949 421 aa13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 SLC35G5Q96KT7 338 aa13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 C6orf62Q9GZU0 229 aaPredicted RBP13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 PLGRKTQ9HBL7 147 aa13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 INTS6Q9UL03 887 aaKnown RBP13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 RAB26Q9ULW5 256 aa13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 ATAD5Q96QE3 1844 aa13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 PSMD11O00231 422 aa13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 UGT2B17O75795 530 aa13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 LAMP2P13473 410 aa13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 AAK1Q2M2I8 961 aa13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 C6orf183Q5T699 404 aa13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 GALNT7Q86SF2 657 aa13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 DEPDC4Q8N2C3 294 aa13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 JPH3Q8WXH2 748 aaPredicted RBP13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 HPS1Q92902 700 aa13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 FAM83CQ9BQN1 747 aa13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 ADI1Q9BV57 179 aa13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 C8orf4Q9NR00 106 aa13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 CTPS2Q9NRF8 586 aa13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 ABCB10Q9NRK6 738 aa13.71□□□□□ -0.21
SHROOM1-203ENST00000378679 COL11A1P12107 1806 aaPredicted RBP13.71□□□□□ -0.22
SHROOM1-203ENST00000378679 GLOD5A6NK44 160 aa13.71□□□□□ -0.22
SHROOM1-203ENST00000378679 RSL1D1O76021 490 aaKnown RBP13.71□□□□□ -0.22
SHROOM1-203ENST00000378679 PRLP01236 227 aa13.71□□□□□ -0.22
SHROOM1-203ENST00000378679 MYL12AP19105 171 aa13.71□□□□□ -0.22
SHROOM1-203ENST00000378679 BTN3A2P78410 334 aa13.71□□□□□ -0.22
SHROOM1-203ENST00000378679 MADCAM1Q13477 382 aa13.71□□□□□ -0.22
SHROOM1-203ENST00000378679 RGS21Q2M5E4 152 aa13.71□□□□□ -0.22
SHROOM1-203ENST00000378679 IFI44LQ53G44 452 aa13.71□□□□□ -0.22
SHROOM1-203ENST00000378679 PRRT3Q5FWE3 981 aa13.71□□□□□ -0.22
SHROOM1-203ENST00000378679 KANK2Q63ZY3 851 aa13.71□□□□□ -0.22
SHROOM1-203ENST00000378679 ARMC5Q96C12 935 aa13.71□□□□□ -0.22
SHROOM1-203ENST00000378679 CNPPD1Q9BV87 410 aa13.71□□□□□ -0.22
SHROOM1-203ENST00000378679 STOX2Q9P2F5 926 aaPredicted RBP13.71□□□□□ -0.22
SHROOM1-203ENST00000378679 DNAJB9Q9UBS3 223 aa13.71□□□□□ -0.22
SHROOM1-203ENST00000378679 M0QX08 132 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 CACNG3O60359 315 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 BMP7P18075 431 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 IL12RB1P42701 662 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 GRIK2Q13002 908 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 SLC13A2Q13183 592 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 TOP3AQ13472 1001 aaPredicted RBP13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 COL9A2Q14055 689 aaPredicted RBP13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 TRAF7Q6Q0C0 670 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 PRR23BQ6ZRT6 265 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 SAMD14Q8IZD0 417 aaPredicted RBP13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 ENDOVQ8N8Q3 282 aaKnown RBP13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 COL21A1Q96P44 957 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 SLC30A3Q99726 388 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 FARSBQ9NSD9 589 aaKnown RBP13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 IFT80Q9P2H3 777 aaPredicted RBP13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 PCDHGB3Q9Y5G1 929 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 NPC1O15118 1278 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 POU2F1P14859 743 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms