RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 OAS3Q9Y6K5 1087 aaKnown RBP8.51□□□□□ -1.05
PCDH9-202ENST00000377865 RIIAD1A6NNX1 92 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 PLOD2O00469 737 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 IFNA16P05015 189 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 HMGN1P05114 100 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 HPGDP15428 266 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 ADRA1AP35348 466 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 OMPP47874 163 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 DCDC1P59894 354 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 RING1Q06587 406 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 ZNHIT3Q15649 155 aaPredicted RBP8.51□□□□□ -1.05
PCDH9-202ENST00000377865 PLEKHS1Q5SXH7 462 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 THOC6Q86W42 341 aaKnown RBP8.51□□□□□ -1.05
PCDH9-202ENST00000377865 KRTCAP2Q8N6L1 136 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 OVCA2Q8WZ82 227 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 B3GALT6Q96L58 329 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 NMUR1Q9HB89 426 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 WDR6Q9NNW5 1121 aaKnown RBP8.51□□□□□ -1.05
PCDH9-202ENST00000377865 SACM1LQ9NTJ5 587 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 ZSCAN32Q9NX65 697 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 CLCA1A8K7I4 914 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 FAAHO00519 579 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 DIRAS1O95057 198 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 OR5F1O95221 314 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 F2P00734 622 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 PDYNP01213 254 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 ALPLP05186 524 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 FYNP06241 537 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 SSR2P43308 183 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 PGGT1BP53609 377 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 PRKCDQ05655 676 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 FADDQ13158 208 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 RAPSNQ13702 412 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 EIPR1Q53HC9 387 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 ATXN7L2Q5T6C5 722 aaPredicted RBP8.5□□□□□ -1.05
PCDH9-202ENST00000377865 MBOAT1Q6ZNC8 495 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 GDPGP1Q6ZNW5 385 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 MARCH9Q86YJ5 346 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 DENND6BQ8NEG7 585 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 ZNF431Q8TF32 576 aaPredicted RBP8.5□□□□□ -1.05
PCDH9-202ENST00000377865 TMEM246Q9BRR3 403 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 C16orf70Q9BSU1 422 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 RANBP3Q9H6Z4 567 aaPredicted RBP8.5□□□□□ -1.05
PCDH9-202ENST00000377865 MCUBQ9NWR8 336 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 ASF1AQ9Y294 204 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 BTAF1O14981 1849 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 SOBPA7XYQ1 873 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 ZNF195O14628 629 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 KCNC4Q03721 635 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 CHRNA6Q15825 494 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 C1orf52Q8N6N3 182 aaKnown RBP8.5□□□□□ -1.05
PCDH9-202ENST00000377865 UPF1Q92900 1129 aaKnown RBP eCLIP8.5□□□□□ -1.05
PCDH9-202ENST00000377865 ZNF558Q96NG5 402 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 MCMBPQ9BTE3 642 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 ARNT2Q9HBZ2 717 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 IFT52Q9Y366 437 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 USP3Q9Y6I4 520 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 AQP9O43315 295 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 ALDOCP09972 364 aaKnown RBP8.5□□□□□ -1.05
PCDH9-202ENST00000377865 SPATA31D3P0C874 917 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 ATF6P18850 670 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 HSD17B2P37059 387 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 PTGR1Q14914 329 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 NOXRED1Q6NXP6 359 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 SPATA31D4Q6ZUB0 917 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 ZNF767PQ75MW2 155 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 RANBP3LQ86VV4 465 aaPredicted RBP8.5□□□□□ -1.05
PCDH9-202ENST00000377865 C15orf40Q8WUR7 153 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 XAGE5Q8WWM1 108 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 FAM129BQ96TA1 746 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 TSSK6Q9BXA6 273 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 EIF3KQ9UBQ5 218 aaKnown RBP8.5□□□□□ -1.05
PCDH9-202ENST00000377865 S100A9P06702 114 aaKnown RBP8.5□□□□□ -1.05
PCDH9-202ENST00000377865 PIM1P11309 404 aaPredicted RBP8.5□□□□□ -1.05
PCDH9-202ENST00000377865 GADD45AP24522 165 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 MAP2K3P46734 347 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 ARSDP51689 593 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 PRR5P85299 388 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 HNRNPA0Q13151 305 aaKnown RBP8.5□□□□□ -1.05
PCDH9-202ENST00000377865 UPP1Q16831 310 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 FUT10Q6P4F1 479 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 DCP2Q8IU60 420 aaKnown RBP8.5□□□□□ -1.05
PCDH9-202ENST00000377865 MTERF1Q99551 399 aaKnown RBP8.5□□□□□ -1.05
PCDH9-202ENST00000377865 C1QTNF7Q9BXJ2 289 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 DPP7Q9UHL4 492 aa8.5□□□□□ -1.05
PCDH9-202ENST00000377865 GSTT2P0CG29 244 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 ATP1B2P14415 290 aaPredicted RBP8.49□□□□□ -1.05
PCDH9-202ENST00000377865 CSKP41240 450 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 ERVPABLB-1P60509 514 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 LAPTM4AQ15012 233 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 MAD2L1BPQ15013 274 aaPredicted RBP8.49□□□□□ -1.05
PCDH9-202ENST00000377865 EXOC3L2Q2M3D2 409 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 CRB2Q5IJ48 1285 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 ADGRF1Q5T601 910 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 FAM117BQ6P1L5 589 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 GPR149Q86SP6 731 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 MMAAQ8IVH4 418 aaKnown RBP8.49□□□□□ -1.05
PCDH9-202ENST00000377865 GDPD1Q8N9F7 314 aa8.49□□□□□ -1.05
PCDH9-202ENST00000377865 FAM98AQ8NCA5 519 aaKnown RBP8.49□□□□□ -1.05
PCDH9-202ENST00000377865 SRFBP1Q8NEF9 429 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms