RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 FAM120CQ9NX05 1096 aaKnown RBP12.77□□□□□ -0.36
ACTN1-202ENST00000376839 RNF186Q9NXI6 227 aa12.77□□□□□ -0.36
ACTN1-202ENST00000376839 KLHL42Q9P2K6 505 aa12.77□□□□□ -0.36
ACTN1-202ENST00000376839 TESMINQ9Y4I5 508 aa12.77□□□□□ -0.36
ACTN1-202ENST00000376839 IGLV3-16A0A075B6K0 115 aa12.77□□□□□ -0.37
ACTN1-202ENST00000376839 A0A1W2PQ45 241 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-202ENST00000376839 A0A1W2PQY0 241 aa12.77□□□□□ -0.37
ACTN1-202ENST00000376839 HTR3EA5X5Y0 456 aa12.77□□□□□ -0.37
ACTN1-202ENST00000376839 CA12O43570 354 aa12.77□□□□□ -0.37
ACTN1-202ENST00000376839 GCM2O75603 506 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-202ENST00000376839 RFPL2O75678 378 aa12.77□□□□□ -0.37
ACTN1-202ENST00000376839 ETHE1O95571 254 aa12.77□□□□□ -0.37
ACTN1-202ENST00000376839 NUDT6P53370 316 aa12.77□□□□□ -0.37
ACTN1-202ENST00000376839 IRF8Q02556 426 aa12.77□□□□□ -0.37
ACTN1-202ENST00000376839 ABRQ12979 859 aa12.77□□□□□ -0.37
ACTN1-202ENST00000376839 CRIPAKQ8N1N5 446 aa12.77□□□□□ -0.37
ACTN1-202ENST00000376839 CPA6Q8N4T0 437 aa12.77□□□□□ -0.37
ACTN1-202ENST00000376839 KIAA1958Q8N8K9 716 aa12.77□□□□□ -0.37
ACTN1-202ENST00000376839 FOXJ1Q92949 421 aa12.77□□□□□ -0.37
ACTN1-202ENST00000376839 SCRN2Q96FV2 425 aa12.77□□□□□ -0.37
ACTN1-202ENST00000376839 EPYCQ99645 322 aa12.77□□□□□ -0.37
ACTN1-202ENST00000376839 RNF167Q9H6Y7 350 aa12.77□□□□□ -0.37
ACTN1-202ENST00000376839 VPS29Q9UBQ0 182 aa12.77□□□□□ -0.37
ACTN1-202ENST00000376839 BACE2Q9Y5Z0 518 aa12.77□□□□□ -0.37
ACTN1-202ENST00000376839 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-202ENST00000376839 PABPN1LA6NDY0 278 aaKnown RBP12.76□□□□□ -0.37
ACTN1-202ENST00000376839 METTL15A6NJ78 407 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 E7EQ34 232 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 GFYI3L273 518 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 OPN1SWP03999 348 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 C1SP09871 688 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 DBTP11182 482 aaKnown RBP12.76□□□□□ -0.37
ACTN1-202ENST00000376839 MAPK8P45983 427 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 CSNK1DP48730 415 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 VEZF1Q14119 521 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 CARTPTQ16568 116 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 ZNF404Q494X3 552 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.76□□□□□ -0.37
ACTN1-202ENST00000376839 LYSMD2Q8IV50 215 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 TRMT2BQ96GJ1 504 aaKnown RBP12.76□□□□□ -0.37
ACTN1-202ENST00000376839 FEVQ99581 238 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 DUSP26Q9BV47 211 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 C6orf62Q9GZU0 229 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-202ENST00000376839 RLIMQ9NVW2 624 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 PSORS1C1Q9UIG5 152 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 GABRR3A8MPY1 467 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 M0R129 80 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 TBX1O43435 398 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 SUV39H1O43463 412 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 UPK1BO75841 260 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 MYO1DO94832 1006 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 ABLIM3O94929 683 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 EFEMP2O95967 443 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 SEPHS1P49903 392 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 SELENBP1Q13228 472 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 TIGD6Q17RP2 521 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 XKR6Q5GH73 641 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 ARMC8Q8IUR7 673 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 WDR20Q8TBZ3 569 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 MRPL9Q9BYD2 267 aaKnown RBP12.76□□□□□ -0.37
ACTN1-202ENST00000376839 STARD7Q9NQZ5 370 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 RAD18Q9NS91 495 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 ANKMY1Q9P2S6 941 aa12.76□□□□□ -0.37
ACTN1-202ENST00000376839 GPC6Q9Y625 555 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-202ENST00000376839 C1orf226A1L170 272 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 SERTM1A2A2V5 107 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 EIF3FO00303 357 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-202ENST00000376839 SCAMP2O15127 329 aaKnown RBP12.75□□□□□ -0.37
ACTN1-202ENST00000376839 PCDH7O60245 1069 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 PRMT3O60678 531 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 LATS1O95835 1130 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 CYP2A7P20853 494 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 HOXD12P35452 270 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 GGT2P36268 569 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 TPTEP56180 551 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 RAE1P78406 368 aaKnown RBP12.75□□□□□ -0.37
ACTN1-202ENST00000376839 ACSM2AQ08AH3 577 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 HKDC1Q2TB90 917 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 STEAP3Q658P3 488 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 ACSM2BQ68CK6 577 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 NAGSQ8N159 534 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 DNAJC22Q8N4W6 341 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 SLC5A8Q8N695 610 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 FAM83FQ8NEG4 500 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-202ENST00000376839 OR52J3Q8NH60 311 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 SPPL2AQ8TCT8 520 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 GGHQ92820 318 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 MIR1-1HGQ9H1L0 117 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 EPS8L2Q9H6S3 715 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 ABCB8Q9NUT2 735 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 SPATA6Q9NWH7 488 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-202ENST00000376839 NDUFAF4Q9P032 175 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 LYVE1Q9Y5Y7 322 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 DSCR3O14972 297 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 ABCB1P08183 1280 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-202ENST00000376839 SRCP12931 536 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 CTSKP43235 329 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 CRISP3P54108 245 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 ELP6Q0PNE2 266 aa12.75□□□□□ -0.37
ACTN1-202ENST00000376839 CSTF3Q12996 717 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms