RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 TAP2Q03519 686 aa19.49■□□□□ 0.71
VSX1-202ENST00000376709 HIST2H2ACQ16777 129 aaPredicted RBP19.49■□□□□ 0.71
VSX1-202ENST00000376709 HIST2H2AA3Q6FI13 130 aa19.49■□□□□ 0.71
VSX1-202ENST00000376709 XKR5Q6UX68 686 aa19.49■□□□□ 0.71
VSX1-202ENST00000376709 HS3ST5Q8IZT8 346 aa19.49■□□□□ 0.71
VSX1-202ENST00000376709 MUS81Q96NY9 551 aa19.49■□□□□ 0.71
VSX1-202ENST00000376709 HDAC8Q9BY41 377 aa19.49■□□□□ 0.71
VSX1-202ENST00000376709 LMAN2LQ9H0V9 348 aa19.49■□□□□ 0.71
VSX1-202ENST00000376709 SMURF2Q9HAU4 748 aa19.49■□□□□ 0.71
VSX1-202ENST00000376709 PIPSLA2A3N6 862 aa19.48■□□□□ 0.71
VSX1-202ENST00000376709 YY2O15391 372 aa19.48■□□□□ 0.71
VSX1-202ENST00000376709 GPX2P18283 190 aa19.48■□□□□ 0.71
VSX1-202ENST00000376709 CDH2P19022 906 aaPredicted RBP19.48■□□□□ 0.71
VSX1-202ENST00000376709 OPRD1P41143 372 aa19.48■□□□□ 0.71
VSX1-202ENST00000376709 PPP1R8Q12972 351 aaKnown RBP19.48■□□□□ 0.71
VSX1-202ENST00000376709 VMACQ2NL98 169 aa19.48■□□□□ 0.71
VSX1-202ENST00000376709 SLC5A11Q8WWX8 675 aa19.48■□□□□ 0.71
VSX1-202ENST00000376709 RAB7BQ96AH8 199 aa19.48■□□□□ 0.71
VSX1-202ENST00000376709 RDH12Q96NR8 316 aa19.48■□□□□ 0.71
VSX1-202ENST00000376709 PLA2G2FQ9BZM2 168 aa19.48■□□□□ 0.71
VSX1-202ENST00000376709 OBP2AQ9NY56 170 aa19.48■□□□□ 0.71
VSX1-202ENST00000376709 SH3BP4Q9P0V3 963 aa19.48■□□□□ 0.71
VSX1-202ENST00000376709 ERVK-11Q9UQG0 969 aa19.48■□□□□ 0.71
VSX1-202ENST00000376709 NOBOXO60393 691 aa19.47■□□□□ 0.71
VSX1-202ENST00000376709 KCNK5O95279 499 aa19.47■□□□□ 0.71
VSX1-202ENST00000376709 ACADLP28330 430 aa19.47■□□□□ 0.71
VSX1-202ENST00000376709 ESRRGP62508 458 aa19.47■□□□□ 0.71
VSX1-202ENST00000376709 MEF2AQ02078 507 aaPredicted RBP19.47■□□□□ 0.71
VSX1-202ENST00000376709 RUNX3Q13761 415 aa19.47■□□□□ 0.71
VSX1-202ENST00000376709 SPIDRQ14159 915 aa19.47■□□□□ 0.71
VSX1-202ENST00000376709 C10orf62Q5T681 223 aaPredicted RBP19.47■□□□□ 0.71
VSX1-202ENST00000376709 ERICH5Q6P6B1 374 aa19.47■□□□□ 0.71
VSX1-202ENST00000376709 FAM83HQ6ZRV2 1179 aaPredicted RBP19.47■□□□□ 0.71
VSX1-202ENST00000376709 WDR34Q96EX3 536 aa19.47■□□□□ 0.71
VSX1-202ENST00000376709 SH3GL3Q99963 347 aa19.47■□□□□ 0.71
VSX1-202ENST00000376709 RBM4BQ9BQ04 359 aaKnown RBP19.47■□□□□ 0.71
VSX1-202ENST00000376709 RBM4Q9BWF3 364 aaKnown RBP19.47■□□□□ 0.71
VSX1-202ENST00000376709 OSBPL10Q9BXB5 764 aa19.47■□□□□ 0.71
VSX1-202ENST00000376709 ING2Q9H160 280 aa19.47■□□□□ 0.71
VSX1-202ENST00000376709 TOR3AQ9H497 397 aa19.47■□□□□ 0.71
VSX1-202ENST00000376709 TPT1P8Q9HAU6 139 aa19.47■□□□□ 0.71
VSX1-202ENST00000376709 PCDHB11Q9Y5F2 797 aa19.47■□□□□ 0.71
VSX1-202ENST00000376709 U3KQV3 271 aa19.47■□□□□ 0.71
VSX1-202ENST00000376709 KIF26AQ9ULI4 1882 aaPredicted RBP19.47■□□□□ 0.71
VSX1-202ENST00000376709 PCCBP05166 539 aa19.47■□□□□ 0.71
VSX1-202ENST00000376709 GJA4P35212 333 aa19.47■□□□□ 0.71
VSX1-202ENST00000376709 PPP2R2BQ00005 443 aa19.47■□□□□ 0.71
VSX1-202ENST00000376709 MYBPC3Q14896 1274 aa19.47■□□□□ 0.71
VSX1-202ENST00000376709 ANXA8L1Q5VT79 327 aa19.47■□□□□ 0.71
VSX1-202ENST00000376709 FAM46CQ5VWP2 391 aa19.47■□□□□ 0.71
VSX1-202ENST00000376709 C11orf96Q7Z7L8 435 aa19.47■□□□□ 0.71
VSX1-202ENST00000376709 HEATR4Q86WZ0 1026 aa19.47■□□□□ 0.71
VSX1-202ENST00000376709 ZDHHC21Q8IVQ6 265 aa19.47■□□□□ 0.71
VSX1-202ENST00000376709 ZZZ3Q8IYH5 903 aa19.47■□□□□ 0.71
VSX1-202ENST00000376709 ZDHHC5Q9C0B5 715 aa19.47■□□□□ 0.71
VSX1-202ENST00000376709 EHD1Q9H4M9 534 aa19.47■□□□□ 0.71
VSX1-202ENST00000376709 THAP10Q9P2Z0 257 aaPredicted RBP19.47■□□□□ 0.71
VSX1-202ENST00000376709 PCYT1BQ9Y5K3 369 aaPredicted RBP19.47■□□□□ 0.71
VSX1-202ENST00000376709 FOXE1O00358 373 aaPredicted RBP19.46■□□□□ 0.71
VSX1-202ENST00000376709 KAT7O95251 611 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 TGFB1P01137 390 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 PCSK6P29122 969 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 ZNF763Q0D2J5 394 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 EPS8Q12929 822 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 CCNYL2Q5T2Q4 361 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 UNC5DQ6UXZ4 953 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 AMZ2Q86W34 360 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 LAS2Q8IYD9 372 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 LRRC56Q8IYG6 542 aaPredicted RBP19.46■□□□□ 0.71
VSX1-202ENST00000376709 OR5K1Q8NHB7 308 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 CDCA3Q99618 268 aaPredicted RBP19.46■□□□□ 0.71
VSX1-202ENST00000376709 DPH2Q9BQC3 489 aaPredicted RBP19.46■□□□□ 0.71
VSX1-202ENST00000376709 OR52A5Q9H2C5 316 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 DMRT3Q9NQL9 472 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 RSL24D1Q9UHA3 163 aaKnown RBP19.46■□□□□ 0.71
VSX1-202ENST00000376709 BTNL2Q9UIR0 455 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 CDH7Q9ULB5 785 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 TRIM64A6NGJ6 449 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 SAP18O00422 153 aaKnown RBP19.46■□□□□ 0.71
VSX1-202ENST00000376709 GBAP04062 536 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 IDSP22304 550 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 SLC5A2P31639 672 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 DCTP40126 519 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 DYNC1I2Q13409 638 aaKnown RBP19.46■□□□□ 0.71
VSX1-202ENST00000376709 PIP5KL1Q5T9C9 394 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 EGFLAMQ63HQ2 1017 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 CPZQ66K79 652 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 PNCKQ6P2M8 343 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 GALNT18Q6P9A2 607 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 SYCE2Q6PIF2 218 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 NXPE4Q6UWF7 544 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 COMMD6Q7Z4G1 85 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 GPR141Q7Z602 305 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 CAMKMTQ7Z624 323 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 PDZD3Q86UT5 571 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 YAF2Q8IY57 180 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 ZNF555Q8NEP9 628 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 OR5AR1Q8NGP9 310 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 RAD51AP1Q96B01 352 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 IL17FQ96PD4 163 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms