RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 GLOD5A6NK44 160 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 FAM220BPB1ANY3 271 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 TLL1O43897 1013 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ADAM23O75077 832 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 SERPINI2O75830 405 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 GADD45GO95257 159 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 BUD31P41223 144 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 WASP42768 502 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 SREBF2Q12772 1141 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 DOC2AQ14183 400 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ARSIQ5FYB1 569 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 TJAP1Q5JTD0 557 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 AGTRAPQ6RW13 159 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 THOC6Q86W42 341 aaKnown RBP13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 DOK4Q8TEW6 326 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 GFM1Q96RP9 751 aaKnown RBP13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 MBOAT4Q96T53 435 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 DYRK4Q9NR20 520 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ZDHHC3Q9NYG2 299 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ENPP5Q9UJA9 477 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 TSPAN6O43657 245 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ELFN1P0C7U0 828 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 GSTT2P0CG29 244 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 GSTT2BP0CG30 244 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 PTRH1Q86Y79 214 aaKnown RBP13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 RBM12BQ8IXT5 1001 aaKnown RBP13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 AQP11Q8NBQ7 271 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CSGALNACT1Q8TDX6 532 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 DSN1Q9H410 356 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CCNB1IP1Q9NPC3 277 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 KLHL3Q9UH77 587 aa13.91□□□□□ -0.18
TNFRSF1B-201ENST00000376259 TAS2R50P59544 299 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 PHC1P78364 1004 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 SP3Q02447 781 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 GRIK2Q13002 908 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 SLBPQ14493 270 aaKnown RBP eCLIP13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CCSMST1Q4G0I0 132 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CLEC12AQ5QGZ9 265 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CPZQ66K79 652 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 NPAS4Q8IUM7 802 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ARMC8Q8IUR7 673 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 GHDCQ8N2G8 530 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 TCAIMQ8N3R3 496 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 EID2BQ96D98 161 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ITPAQ9BY32 194 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 HMX1Q9NP08 348 aaPredicted RBP13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 KIAA1522Q9P206 1035 aaPredicted RBP13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ITM2BQ9Y287 266 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ALPK2Q86TB3 2170 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 FAM155AB1AL88 458 aaPredicted RBP13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 PLK4O00444 970 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CH25HO95992 272 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CCDC159P0C7I6 412 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 MAGEA11P43364 429 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CLDN8P56748 225 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ISL1P61371 349 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 TUBA3CQ13748 450 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 EXOC3L2Q2M3D2 409 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 LEXMQ3ZCV2 418 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 AFMIDQ63HM1 303 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 OLIG3Q7RTU3 272 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 FAM83FQ8NEG4 500 aaPredicted RBP13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 KBTBD8Q8NFY9 601 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 EMILIN2Q9BXX0 1053 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 NLNQ9BYT8 704 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 TBCCD1Q9NVR7 557 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CLN6Q9NWW5 311 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 MRPS7Q9Y2R9 242 aaKnown RBP13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 PCDHGB3Q9Y5G1 929 aa13.9□□□□□ -0.18
TNFRSF1B-201ENST00000376259 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CD97P48960 835 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CATSPEREQ5SY80 951 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CST9Q5W186 159 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 NEK5Q6P3R8 708 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CRTC1Q6UUV9 634 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 FAM131AQ6UXB0 335 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 BEND5Q7L4P6 421 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CITED4Q96RK1 184 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 TRIB3Q96RU7 358 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 TUBA1CQ9BQE3 449 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 HTATIP2Q9BUP3 242 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 OR2AG1Q9H205 316 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 BOLA1Q9Y3E2 137 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 ANK1P16157 1881 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 GSAPA4D1B5 854 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 PRSS23O95084 383 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 SLC16A8O95907 504 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 C9P02748 559 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CYBAP13498 195 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CLCN4P51793 760 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CNTN1Q12860 1018 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 SCARB2Q14108 478 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 PLEKHG6Q3KR16 790 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 C17orf99Q6UX52 265 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 RD3Q7Z3Z2 195 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CADM3Q8N126 398 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CELF5Q8N6W0 485 aaKnown RBP13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 ZFP41Q8N8Y5 198 aa13.89□□□□□ -0.19
TNFRSF1B-201ENST00000376259 DNASE1L2Q92874 299 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms