RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 POLR1EQ9GZS1 481 aaKnown RBP12.51□□□□□ -0.41
MSH5-204ENST00000375755 SYTL2Q9HCH5 934 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 AASDHPPTQ9NRN7 309 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 HCFC1R1Q9NWW0 138 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 FNIP2Q9P278 1114 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 DNAH14Q0VDD8 3507 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 LOC285095A0A1B0GVY8 99 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 MEIOCA2RUB1 952 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 K7ERQ8 282 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 GREM1O60565 184 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 TBL1XO60907 577 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 CYP7B1O75881 506 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 AKT1P31749 480 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 PIK3CBP42338 1070 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 LIMK1P53667 647 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 CDH4P55283 916 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 TBCEQ15813 527 aaPredicted RBP12.51□□□□□ -0.41
MSH5-204ENST00000375755 ADGRF1Q5T601 910 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 TPGS2Q68CL5 300 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 FBXO46Q6PJ61 603 aaPredicted RBP12.51□□□□□ -0.41
MSH5-204ENST00000375755 FAM20CQ8IXL6 584 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 GPR150Q8NGU9 434 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 ZNF382Q96SR6 550 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 GPR21Q99679 349 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 BEX2Q9BXY8 128 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 TNKS2Q9H2K2 1166 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 ACOXLQ9NUZ1 547 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 C1orf109Q9NX04 203 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 SIRT5Q9NXA8 310 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 FAM25AB3EWG3 89 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 FAM25CB3EWG5 89 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 FAM25GB3EWG6 89 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 hCG_2039718K7EN88 272 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 TFECO14948 347 aaPredicted RBP12.51□□□□□ -0.41
MSH5-204ENST00000375755 LILRB3O75022 631 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 ZNF682O95780 498 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 SLC2A4P14672 509 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 PRKACBP22694 351 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 GABRR2P28476 465 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 GZMMP51124 257 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 STC1P52823 247 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 YBEYP58557 167 aaPredicted RBP12.51□□□□□ -0.41
MSH5-204ENST00000375755 RPL38P63173 70 aaKnown RBP12.51□□□□□ -0.41
MSH5-204ENST00000375755 ACVR1Q04771 509 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 ABRAXAS2Q15018 415 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 C18orf21Q32NC0 220 aaPredicted RBP12.51□□□□□ -0.41
MSH5-204ENST00000375755 Q6ZPB1 254 aaPredicted RBP12.51□□□□□ -0.41
MSH5-204ENST00000375755 CALHM3Q86XJ0 350 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 KRTCAP2Q8N6L1 136 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 NATD1Q8N6N6 113 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 OR6K2Q8NGY2 324 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 CCDC32Q9BV29 185 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 KRT84Q9NSB2 600 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 CATSPERZQ9NTU4 200 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 FNDC3AQ9Y2H6 1198 aaKnown RBP12.51□□□□□ -0.41
MSH5-204ENST00000375755 SNX8Q9Y5X2 465 aa12.51□□□□□ -0.41
MSH5-204ENST00000375755 PCM1Q15154 2024 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.5□□□□□ -0.41
MSH5-204ENST00000375755 LINC00854A0A1B0GVQ3 168 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 HIDE1A8MVS5 230 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 FAM220BPB1ANY3 271 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 VIPP01282 170 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 YES1P07947 543 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 DDX5P17844 614 aaKnown RBP12.5□□□□□ -0.41
MSH5-204ENST00000375755 LAG3P18627 525 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 ERVFC1P60507 584 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 ZNF177Q13360 481 aaPredicted RBP12.5□□□□□ -0.41
MSH5-204ENST00000375755 PLPP6Q8IY26 295 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 PLD4Q96BZ4 506 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 FAM120BQ96EK7 910 aaKnown RBP12.5□□□□□ -0.41
MSH5-204ENST00000375755 SLC30A2Q9BRI3 323 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 TAS2R13Q9NYV9 303 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 CD274Q9NZQ7 290 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 NUFIP1Q9UHK0 495 aaKnown RBP12.5□□□□□ -0.41
MSH5-204ENST00000375755 PSORS1C1Q9UIG5 152 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 TRBV5-3A0A0A0MS03 114 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 A0A1W2PRU2 124 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 PER2O15055 1255 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 ITGA2P17301 1181 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 IL1RNP18510 177 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 EPHB3P54753 998 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 ELP6Q0PNE2 266 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 TP53BP2Q13625 1128 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 VEPH1Q14D04 833 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 HORMAD1Q86X24 394 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 TCEAL8Q8IYN2 117 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 ATG16L2Q8NAA4 619 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 OR5H6Q8NGV6 325 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 OR4L1Q8NH43 312 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 ZNF675Q8TD23 568 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 SLC7A6Q92536 515 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 TMCO6Q96DC7 493 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 TRNT1Q96Q11 434 aaKnown RBP12.5□□□□□ -0.41
MSH5-204ENST00000375755 ZBTB18Q99592 522 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 PITX2Q99697 317 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 DHRS9Q9BPW9 319 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 MMP28Q9H239 520 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 UBA2Q9UBT2 640 aaPredicted RBP12.5□□□□□ -0.41
MSH5-204ENST00000375755 MUTYHQ9UIF7 546 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 SATB2Q9UPW6 733 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms