RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 F2P00734 622 aa16.66■□□□□ 0.26
MCF2L-203ENST00000375604 PIGRP01833 764 aa16.66■□□□□ 0.26
MCF2L-203ENST00000375604 GPIP06744 558 aa16.66■□□□□ 0.26
MCF2L-203ENST00000375604 PSKH1P11801 424 aa16.66■□□□□ 0.26
MCF2L-203ENST00000375604 PRDX6P30041 224 aa16.66■□□□□ 0.26
MCF2L-203ENST00000375604 VIPR2P41587 438 aa16.66■□□□□ 0.26
MCF2L-203ENST00000375604 DUOXA1Q1HG43 343 aa16.66■□□□□ 0.26
MCF2L-203ENST00000375604 KRTCAP2Q8N6L1 136 aa16.66■□□□□ 0.26
MCF2L-203ENST00000375604 DTX3Q8N9I9 347 aa16.66■□□□□ 0.26
MCF2L-203ENST00000375604 CAMKVQ8NCB2 501 aa16.66■□□□□ 0.26
MCF2L-203ENST00000375604 ZNF461Q8TAF7 563 aa16.66■□□□□ 0.26
MCF2L-203ENST00000375604 MGME1Q9BQP7 344 aa16.66■□□□□ 0.26
MCF2L-203ENST00000375604 NPIPA1Q9UND3 350 aa16.66■□□□□ 0.26
MCF2L-203ENST00000375604 CAPZA1P52907 286 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 SEMA3AQ14563 771 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 DSC3Q14574 896 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 GPR33Q49SQ1 333 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 AQP11Q8NBQ7 271 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 TNFAIP8L1Q8WVP5 186 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 EZH1Q92800 747 aaPredicted RBP16.65■□□□□ 0.26
MCF2L-203ENST00000375604 SLC22A18Q96BI1 424 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 ZSWIM3Q96MP5 696 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 ZNF599Q96NL3 588 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 WDR12Q9GZL7 423 aaKnown RBP16.65■□□□□ 0.26
MCF2L-203ENST00000375604 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.65■□□□□ 0.268e-7■■■□□ 18.6
MCF2L-203ENST00000375604 KCNH6Q9H252 994 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 GPR89AB7ZAQ6 455 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 GPR89BP0CG08 455 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 TDRPQ86YL5 185 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 CANT1Q8WVQ1 401 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 TMBIM1Q969X1 311 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 PRICKLE1Q96MT3 831 aaPredicted RBP16.65■□□□□ 0.26
MCF2L-203ENST00000375604 OSBPL7Q9BZF2 842 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 TLR4O00206 839 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 CCNKO75909 580 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 XRCC1P18887 633 aaPredicted RBP16.65■□□□□ 0.26
MCF2L-203ENST00000375604 ACADLP28330 430 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 SERINC3Q13530 473 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 KLHL26Q53HC5 615 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 CMASQ8NFW8 434 aaPredicted RBP16.65■□□□□ 0.26
MCF2L-203ENST00000375604 HRASLS2Q9NWW9 162 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 OR1A2Q9Y585 309 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 J3QRK9 145 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 TRMUO75648 421 aaKnown RBP16.65■□□□□ 0.26
MCF2L-203ENST00000375604 FHP07954 510 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 PRSS56P0CW18 603 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 PNLIPRP1P54315 467 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 SYT16Q17RD7 645 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 SCGB2B2Q4G0G5 96 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 TPRG1Q6ZUI0 275 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 CCDC116Q8IYX3 515 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 OR10T2Q8NGX3 314 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 IRF7Q92985 503 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 POLR2J2Q9GZM3 115 aaKnown RBP16.65■□□□□ 0.26
MCF2L-203ENST00000375604 FAM159BA6NKW6 160 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 KMOO15229 486 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 KCNE1P15382 129 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 ATP5A1P25705 553 aaKnown RBP16.65■□□□□ 0.26
MCF2L-203ENST00000375604 GPR17Q13304 367 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 SPIN4Q56A73 249 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 ZNF676Q8N7Q3 588 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 C16orf70Q9BSU1 422 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 VNN3Q9NY84 501 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 SPATA7Q9P0W8 599 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 SLC45A1Q9Y2W3 748 aa16.65■□□□□ 0.26
MCF2L-203ENST00000375604 A0A1W2PRG6 482 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 JMJD7P0C870 316 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 SCN1BQ07699 218 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 SWI5Q1ZZU3 235 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 AGTRAPQ6RW13 159 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 APCDD1Q8J025 514 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 TM9SF2Q99805 663 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 P2RY13Q9BPV8 354 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 CST11Q9H112 138 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 IGLON5A6NGN9 336 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 MEIS3P2A8K0S8 358 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 ALDH3A2P51648 485 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 ZNF267Q14586 743 aaPredicted RBP16.64■□□□□ 0.25
MCF2L-203ENST00000375604 LASP1Q14847 261 aaKnown RBP16.64■□□□□ 0.25
MCF2L-203ENST00000375604 TIGD6Q17RP2 521 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 ASTE1Q2TB18 679 aaPredicted RBP16.64■□□□□ 0.25
MCF2L-203ENST00000375604 DRICH1Q6PGQ1 229 aaPredicted RBP16.64■□□□□ 0.25
MCF2L-203ENST00000375604 LRRC70Q7Z2Q7 622 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 DGCR14Q96DF8 476 aaKnown RBP16.64■□□□□ 0.25
MCF2L-203ENST00000375604 NOX1Q9Y5S8 564 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 NID2Q14112 1375 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 PRAMEF11O60813 436 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 CYB5AP00167 134 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 IQCCQ4KMZ1 466 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 ACSBG2Q5FVE4 666 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 RABL3Q5HYI8 236 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 HSPBAP1Q96EW2 488 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 SHDQ96IW2 340 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 FBRSL1Q9HCM7 1045 aaKnown RBP16.64■□□□□ 0.25
MCF2L-203ENST00000375604 IL1RAPQ9NPH3 570 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 DNAJB9Q9UBS3 223 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 TSPAN6O43657 245 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 PRPS1L1P21108 318 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 MLLT6P55198 1093 aaPredicted RBP16.64■□□□□ 0.25
MCF2L-203ENST00000375604 CEP97Q8IW35 865 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms