RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 SLC41A3Q96GZ6 507 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 CDKN2AIPNLQ96HQ2 116 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 ZNF570Q96NI8 536 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 GMLQ99445 158 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 SLC39A8Q9C0K1 460 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 NGBQ9NPG2 151 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 C11orf16Q9NQ32 467 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 UBQLN2Q9UHD9 624 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 UBE2J1Q9Y385 318 aaPredicted RBP4.53□□□□□ -1.68
SCN1A-202ENST00000375405 AP4B1Q9Y6B7 739 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 SCN8AQ9UQD0 1980 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 MYPNQ86TC9 1320 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 EEF1E1-BLOC1S5C9J1V9 151 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 MAGEB4O15481 346 aaPredicted RBP4.53□□□□□ -1.68
SCN1A-202ENST00000375405 EEF1E1O43324 174 aaKnown RBP4.53□□□□□ -1.68
SCN1A-202ENST00000375405 HOXA3O43365 443 aaPredicted RBP4.53□□□□□ -1.68
SCN1A-202ENST00000375405 RNF13O43567 381 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 OR2T1O43869 369 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 PSKH1P11801 424 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 PRKACAP17612 351 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 KITLGP21583 273 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 NDUFS1P28331 727 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 PRDX3P30048 256 aaKnown RBP4.53□□□□□ -1.68
SCN1A-202ENST00000375405 MMP12P39900 470 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 CDK9P50750 372 aaKnown RBP4.53□□□□□ -1.68
SCN1A-202ENST00000375405 NEK3P51956 506 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 PTGR1Q14914 329 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 FAM189A2Q15884 450 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 SLC15A2Q16348 729 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 SEZ6Q53EL9 994 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 WDR45BQ5MNZ6 344 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 CST9LP1Q5W188 147 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 SIGIRRQ6IA17 410 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 TICAM1Q8IUC6 712 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 RDH10Q8IZV5 341 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 RNF175Q8N4F7 328 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 BANPQ8N9N5 519 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 NSMAFQ92636 917 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 NXPE3Q969Y0 559 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 ITPKCQ96DU7 683 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 NOL4LQ96MY1 436 aaPredicted RBP4.53□□□□□ -1.68
SCN1A-202ENST00000375405 TM9SF2Q99805 663 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 SCPEP1Q9HB40 452 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 PAK6Q9NQU5 681 aaPredicted RBP4.53□□□□□ -1.68
SCN1A-202ENST00000375405 PIK3C2GO75747 1445 aa4.53□□□□□ -1.68
SCN1A-202ENST00000375405 BLMP54132 1417 aaPredicted RBP4.53□□□□□ -1.68
SCN1A-202ENST00000375405 A0A1W2PS29 197 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 FAM205CA6NFA0 338 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 FADS1O60427 444 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 AKAP3O75969 853 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 CBX6O95503 412 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 CD247P20963 164 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 UQCRC2P22695 453 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 VHLP40337 213 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 AMTP48728 403 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 LHX1P48742 406 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 E2F1Q01094 437 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 ELAVL2Q12926 359 aaKnown RBP4.53□□□□□ -1.69
SCN1A-202ENST00000375405 HERC3Q15034 1050 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 GJB7Q6PEY0 223 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 DHFR2Q86XF0 187 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 ZFP82Q8N141 532 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 DTWD1Q8N5C7 304 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 OR10A6Q8NH74 314 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 CMTM2Q8TAZ6 248 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.53□□□□□ -1.69
SCN1A-202ENST00000375405 MAP4K1Q92918 833 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 SLCO2A1Q92959 643 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 ARRDC3Q96B67 414 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 DIRAS2Q96HU8 199 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 PPM1MQ96MI6 270 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 AGAP2Q99490 1192 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 APBA2Q99767 749 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 MMP27Q9H306 513 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 IPPKQ9H8X2 491 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 RAB9BQ9NP90 201 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 ACSS1Q9NUB1 689 aaPredicted RBP4.53□□□□□ -1.69
SCN1A-202ENST00000375405 HPSEQ9Y251 543 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 CDH10Q9Y6N8 788 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 U3KQV3 271 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 PTPRKQ15262 1439 aa4.53□□□□□ -1.69
SCN1A-202ENST00000375405 PEG3Q9GZU2 1588 aa4.52□□□□□ -1.69
SCN1A-202ENST00000375405 A0A0A6YYK5 440 aaPredicted RBP4.52□□□□□ -1.69
SCN1A-202ENST00000375405 A0A1B0GVI7 797 aa4.52□□□□□ -1.69
SCN1A-202ENST00000375405 LGALS16A8MUM7 142 aa4.52□□□□□ -1.69
SCN1A-202ENST00000375405 TOR1BO14657 336 aa4.52□□□□□ -1.69
SCN1A-202ENST00000375405 RECQL5O94762 991 aaPredicted RBP4.52□□□□□ -1.69
SCN1A-202ENST00000375405 TNFP01375 233 aa4.52□□□□□ -1.69
SCN1A-202ENST00000375405 RHBDL3P58872 404 aa4.52□□□□□ -1.69
SCN1A-202ENST00000375405 PLAC9Q5JTB6 97 aa4.52□□□□□ -1.69
SCN1A-202ENST00000375405 DGAT2L7PQ6IED9 249 aa4.52□□□□□ -1.69
SCN1A-202ENST00000375405 ZNF425Q6IV72 752 aa4.52□□□□□ -1.69
SCN1A-202ENST00000375405 WDR53Q7Z5U6 358 aaPredicted RBP4.52□□□□□ -1.69
SCN1A-202ENST00000375405 ZNF410Q86VK4 478 aa4.52□□□□□ -1.69
SCN1A-202ENST00000375405 WDR49Q8IV35 697 aa4.52□□□□□ -1.69
SCN1A-202ENST00000375405 OR5B17Q8NGF7 314 aa4.52□□□□□ -1.69
SCN1A-202ENST00000375405 C9orf43Q8TAL5 461 aaPredicted RBP4.52□□□□□ -1.69
SCN1A-202ENST00000375405 OR2J1Q9GZK6 312 aa4.52□□□□□ -1.69
SCN1A-202ENST00000375405 MKKSQ9NPJ1 570 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms