RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 MDC1Q14676 2089 aaKnown RBP18.25■□□□□ 0.51
TRAPPC3-204ENST00000373166 PCM1Q15154 2024 aa18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 A0A1W2PPV9 198 aa18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 TARM1B6A8C7 271 aa18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 CCL21O00585 134 aa18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 MAP2K7O14733 419 aa18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 CMPK1P30085 196 aa18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 TNFSF10P50591 281 aa18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 PNLIPRP1P54315 467 aa18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 CDKN2DP55273 166 aa18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 OCA2Q04671 838 aa18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 PDAP1Q13442 181 aaKnown RBP18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 FASTKQ14296 549 aaKnown RBP18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 ZNF630Q2M218 657 aaPredicted RBP18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 VWA2Q5GFL6 755 aa18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 DUPD1Q68J44 220 aa18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 FAM45BPQ6NSW5 357 aa18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 RPTNQ6XPR3 784 aa18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 PALM2Q8IXS6 379 aa18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 METTL27Q8N6F8 245 aaPredicted RBP18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 OR2A1Q8NGT9 310 aa18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 FAM45AQ8TCE6 357 aa18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 PYROXD1Q8WU10 500 aa18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 ZUFSPQ96AP4 578 aa18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 CCDC120Q96HB5 630 aa18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 SAYSD1Q9NPB0 183 aa18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 GRHL1Q9NZI5 618 aa18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 PTGFRNQ9P2B2 879 aa18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 MAU2Q9Y6X3 613 aa18.24■□□□□ 0.51
TRAPPC3-204ENST00000373166 CCDC88CQ9P219 2028 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 FITM1A5D6W6 292 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 GFYI3L273 518 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 EIF3HO15372 352 aaKnown RBP eCLIP18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 SRPX2O60687 465 aaPredicted RBP18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 KRT38O76015 456 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 URI1O94763 535 aaPredicted RBP18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 CCNDBP1O95273 360 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 SLC16A8O95907 504 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 C8GP07360 202 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 SNRPB2P08579 225 aaKnown RBP18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 FDXRP22570 491 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 CAV1Q03135 178 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 KLC1Q07866 573 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 CBLBQ13191 982 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 SP140Q13342 867 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 HECTD2Q5U5R9 776 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 CYHR1Q6ZMK1 362 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 CAPN12Q6ZSI9 719 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 SLC26A11Q86WA9 606 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 SPNS2Q8IVW8 549 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 STT3BQ8TCJ2 826 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 EEF1AKMT1Q8WVE0 214 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 HAS2Q92819 552 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 MIEF2Q96C03 454 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 LINGO1Q96FE5 620 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 ZNF285Q96NJ3 590 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 ACAT2Q9BWD1 397 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 ZNF304Q9HCX3 659 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 NSMCE4AQ9NXX6 385 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 PLA2G3Q9NZ20 509 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 ZNF282Q9UDV7 671 aaPredicted RBP18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 C3orf18Q9UK00 162 aa18.23■□□□□ 0.51
TRAPPC3-204ENST00000373166 TACC2O95359 2948 aa18.22■□□□□ 0.51
TRAPPC3-204ENST00000373166 NSG1A0A0A6YYJ2 146 aa18.22■□□□□ 0.51
TRAPPC3-204ENST00000373166 PABPN1LA6NDY0 278 aaKnown RBP18.22■□□□□ 0.51
TRAPPC3-204ENST00000373166 UNC5CO95185 931 aa18.22■□□□□ 0.51
TRAPPC3-204ENST00000373166 ZGLP1P0C6A0 271 aa18.22■□□□□ 0.51
TRAPPC3-204ENST00000373166 TIAL1Q01085 375 aaKnown RBP eCLIP18.22■□□□□ 0.51
TRAPPC3-204ENST00000373166 ATG9BQ674R7 924 aa18.22■□□□□ 0.51
TRAPPC3-204ENST00000373166 C8orf74Q6P047 294 aa18.22■□□□□ 0.51
TRAPPC3-204ENST00000373166 PRMT9Q6P2P2 845 aa18.22■□□□□ 0.51
TRAPPC3-204ENST00000373166 PAQR3Q6TCH7 311 aa18.22■□□□□ 0.51
TRAPPC3-204ENST00000373166 SUSD1Q6UWL2 747 aa18.22■□□□□ 0.51
TRAPPC3-204ENST00000373166 NDUFAF7Q7L592 441 aa18.22■□□□□ 0.51
TRAPPC3-204ENST00000373166 PRSS58Q8IYP2 241 aa18.22■□□□□ 0.51
TRAPPC3-204ENST00000373166 MCOLN3Q8TDD5 553 aa18.22■□□□□ 0.51
TRAPPC3-204ENST00000373166 ZNF480Q8WV37 535 aa18.22■□□□□ 0.51
TRAPPC3-204ENST00000373166 ZNF592Q92610 1267 aa18.22■□□□□ 0.51
TRAPPC3-204ENST00000373166 C8orf44Q96CB5 159 aa18.22■□□□□ 0.51
TRAPPC3-204ENST00000373166 MESP1Q9BRJ9 268 aa18.22■□□□□ 0.51
TRAPPC3-204ENST00000373166 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.22■□□□□ 0.51
TRAPPC3-204ENST00000373166 MRPS30Q9NP92 439 aaKnown RBP18.22■□□□□ 0.51
TRAPPC3-204ENST00000373166 MOCS1Q9NZB8 636 aa18.22■□□□□ 0.51
TRAPPC3-204ENST00000373166 SEC14L3Q9UDX4 400 aa18.22■□□□□ 0.51
TRAPPC3-204ENST00000373166 TAC3Q9UHF0 121 aa18.22■□□□□ 0.51
TRAPPC3-204ENST00000373166 ITGB1BP2Q9UKP3 347 aa18.22■□□□□ 0.51
TRAPPC3-204ENST00000373166 MRPS2Q9Y399 296 aaKnown RBP18.22■□□□□ 0.51
TRAPPC3-204ENST00000373166 KLK4Q9Y5K2 254 aa18.22■□□□□ 0.51
TRAPPC3-204ENST00000373166 F8P00451 2351 aa18.22■□□□□ 0.51
TRAPPC3-204ENST00000373166 HYKKA2RU49 373 aa18.21■□□□□ 0.51
TRAPPC3-204ENST00000373166 CRYABP02511 175 aaKnown RBP18.21■□□□□ 0.51
TRAPPC3-204ENST00000373166 UQCRHP07919 91 aa18.21■□□□□ 0.51
TRAPPC3-204ENST00000373166 PRR35P0CG20 571 aa18.21■□□□□ 0.51
TRAPPC3-204ENST00000373166 SOX11P35716 441 aa18.21■□□□□ 0.51
TRAPPC3-204ENST00000373166 CA7P43166 264 aa18.21■□□□□ 0.51
TRAPPC3-204ENST00000373166 PLTPP55058 493 aa18.21■□□□□ 0.51
TRAPPC3-204ENST00000373166 VSX2P58304 361 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC3-204ENST00000373166 IL2P60568 153 aa18.21■□□□□ 0.51
TRAPPC3-204ENST00000373166 RBPJQ06330 500 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms