RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 SH3BGRLO75368 114 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 TACR1P25103 407 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 TLR1Q15399 786 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 ZNF423Q2M1K9 1284 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 PRMT9Q6P2P2 845 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 VN1R5Q7Z5H4 357 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 C11orf74Q86VG3 221 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 SYT12Q8IV01 421 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 SDR16C5Q8N3Y7 309 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 ANKRD53Q8N9V6 530 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 AVL9Q8NBF6 648 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 CLHC1Q8NHS4 586 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 DPH7Q9BTV6 452 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 TWSG1Q9GZX9 223 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 OR51B5Q9H339 312 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 SPAG4Q9NPE6 437 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 DOLKQ9UPQ8 538 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 CACNA1IQ9P0X4 2223 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 TRBC2A0A5B9 178 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 FEZF1A0PJY2 475 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 PRPS1L1P21108 318 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 CSNK1EP49674 416 aaKnown RBP25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 FOXM1Q08050 763 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 TRMT5Q32P41 509 aaKnown RBP25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 C8orf82Q6P1X6 216 aaPredicted RBP25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 KRTCAP2Q8N6L1 136 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 GPR156Q8NFN8 814 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 LMX1AQ8TE12 382 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 EBPLQ9BY08 206 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 SLC6A20Q9NP91 592 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 AHSPQ9NZD4 102 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 MAPRE3Q9UPY8 281 aa25.23■■□□□ 1.63
ATPAF1-202ENST00000371937 ASPDHA6ND91 283 aa25.22■■□□□ 1.63
ATPAF1-202ENST00000371937 GSTM2P28161 218 aa25.22■■□□□ 1.63
ATPAF1-202ENST00000371937 TIA1P31483 386 aaKnown RBP eCLIP25.22■■□□□ 1.63
ATPAF1-202ENST00000371937 ASMTP46597 345 aa25.22■■□□□ 1.63
ATPAF1-202ENST00000371937 FAM174BQ3ZCQ3 159 aa25.22■■□□□ 1.63
ATPAF1-202ENST00000371937 MINDY1Q8N5J2 469 aa25.22■■□□□ 1.63
ATPAF1-202ENST00000371937 DPP10Q8N608 796 aa25.22■■□□□ 1.63
ATPAF1-202ENST00000371937 STARD8Q92502 1023 aa25.22■■□□□ 1.63
ATPAF1-202ENST00000371937 TESCQ96BS2 214 aa25.22■■□□□ 1.63
ATPAF1-202ENST00000371937 KNL1Q8NG31 2342 aa25.22■■□□□ 1.63
ATPAF1-202ENST00000371937 PDE5AO76074 875 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 ANXA4P09525 319 aaPredicted RBP25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 TDGF1P13385 188 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 RAE1P78406 368 aaKnown RBP25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 HHEXQ03014 270 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 NFYCQ13952 458 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 TEAD4Q15561 434 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 PIGGQ5H8A4 983 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 C1orf146Q5VVC0 180 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 METTL4Q8N3J2 472 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 FBXL6Q8N531 539 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 LRRC58Q96CX6 371 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 ADA2Q9NZK5 511 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 ENTPD2Q9Y5L3 495 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 B4DGG1 531 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 SEMA3DO95025 777 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 PGRP06401 933 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 DPP6P42658 865 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 DGKQP52824 942 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 DPY19L1Q2PZI1 675 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 PAGE3Q5JUK9 113 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 KIAA1614Q5VZ46 1190 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 COMMD6Q7Z4G1 85 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 HPS6Q86YV9 775 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 RIMKLAQ8IXN7 391 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 SLC13A3Q8WWT9 602 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 TMEM74Q96NL1 305 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 GPATCH1Q9BRR8 931 aaKnown RBP25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 SARGQ9BW04 601 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 MS4A8Q9BY19 250 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 IL1RL2Q9HB29 575 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 PCDHGA2Q9Y5H1 932 aa25.21■■□□□ 1.63
ATPAF1-202ENST00000371937 GNG14A0A1W2PPG7 69 aa25.2■■□□□ 1.62
ATPAF1-202ENST00000371937 OR6C74A6NCV1 312 aa25.2■■□□□ 1.62
ATPAF1-202ENST00000371937 PCDH7O60245 1069 aa25.2■■□□□ 1.62
ATPAF1-202ENST00000371937 CLEC3AO75596 197 aa25.2■■□□□ 1.62
ATPAF1-202ENST00000371937 C21orf58P58505 322 aa25.2■■□□□ 1.62
ATPAF1-202ENST00000371937 KPNB1Q14974 876 aaKnown RBP25.2■■□□□ 1.62
ATPAF1-202ENST00000371937 SPANXN4Q5MJ08 99 aa25.2■■□□□ 1.62
ATPAF1-202ENST00000371937 DEPDC1Q5TB30 811 aa25.2■■□□□ 1.62
ATPAF1-202ENST00000371937 KHDRBS2Q5VWX1 349 aaKnown RBP25.2■■□□□ 1.62
ATPAF1-202ENST00000371937 TMEM26Q6ZUK4 368 aa25.2■■□□□ 1.62
ATPAF1-202ENST00000371937 FAM20CQ8IXL6 584 aa25.2■■□□□ 1.62
ATPAF1-202ENST00000371937 WDR60Q8WVS4 1066 aa25.2■■□□□ 1.62
ATPAF1-202ENST00000371937 EGLN2Q96KS0 407 aa25.2■■□□□ 1.62
ATPAF1-202ENST00000371937 CENPKQ9BS16 269 aa25.2■■□□□ 1.62
ATPAF1-202ENST00000371937 RASSF4Q9H2L5 321 aa25.2■■□□□ 1.62
ATPAF1-202ENST00000371937 TDRD6O60522 2096 aaKnown RBP25.2■■□□□ 1.62
ATPAF1-202ENST00000371937 HEATR5BQ9P2D3 2071 aa25.19■■□□□ 1.62
ATPAF1-202ENST00000371937 YY2O15391 372 aa25.19■■□□□ 1.62
ATPAF1-202ENST00000371937 AQP9O43315 295 aa25.19■■□□□ 1.62
ATPAF1-202ENST00000371937 LCMT2O60294 686 aaKnown RBP25.19■■□□□ 1.62
ATPAF1-202ENST00000371937 ATP6V1G2O95670 118 aa25.19■■□□□ 1.62
ATPAF1-202ENST00000371937 CYP4F2P78329 520 aa25.19■■□□□ 1.62
ATPAF1-202ENST00000371937 LYSMD4Q5XG99 296 aa25.19■■□□□ 1.62
ATPAF1-202ENST00000371937 ZNF425Q6IV72 752 aa25.19■■□□□ 1.62
ATPAF1-202ENST00000371937 PRR23BQ6ZRT6 265 aa25.19■■□□□ 1.62
ATPAF1-202ENST00000371937 C1orf210Q8IVY1 113 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms