RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 SNX7Q9UNH6 387 aa9.35□□□□□ -0.91
LRRC40-201ENST00000370952 MAN2B2Q9Y2E5 1009 aa9.35□□□□□ -0.91
LRRC40-201ENST00000370952 CFAP20Q9Y6A4 193 aaKnown RBP9.35□□□□□ -0.91
LRRC40-201ENST00000370952 COL4A4P53420 1690 aaPredicted RBP9.35□□□□□ -0.91
LRRC40-201ENST00000370952 ALPK3Q96L96 1907 aa9.35□□□□□ -0.91
LRRC40-201ENST00000370952 RRN3P2A6NIE6 340 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 C2orf81A6NN90 581 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 TEX28O15482 410 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 PDYNP01213 254 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 CHRM5P08912 532 aaPredicted RBP9.34□□□□□ -0.91
LRRC40-201ENST00000370952 CKMT1AP12532 417 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 TTPAP49638 278 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 OLR1P78380 273 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 FCHO2Q0JRZ9 810 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 CYP27C1Q4G0S4 372 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 IQCCQ4KMZ1 466 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 DPY19L3Q6ZPD9 716 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 EIF3MQ7L2H7 374 aaKnown RBP9.34□□□□□ -0.91
LRRC40-201ENST00000370952 ABI3BPQ7Z7G0 1075 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 CLECL1Q8IZS7 167 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 ZNF557Q8N988 423 aaPredicted RBP9.34□□□□□ -0.91
LRRC40-201ENST00000370952 OR7D4Q8NG98 312 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 LKAAEAR1Q8TD35 194 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 OMA1Q96E52 524 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 C7orf34Q96L11 122 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 C1orf74Q96LT6 269 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 VPS35Q96QK1 796 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 RAD9AQ99638 391 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 SPON2Q9BUD6 331 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 TRIM62Q9BVG3 475 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 NARFLQ9H6Q4 476 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 A0A075B6Q4 140 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 A0A0G2JLL6 359 aaPredicted RBP9.34□□□□□ -0.91
LRRC40-201ENST00000370952 SMIM35A0A1B0GVV1 85 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 E9PQ18 207 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 TNFRSF11BO00300 401 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 TNFRSF10BO14763 440 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 FPGTO14772 594 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 STX7O15400 261 aaKnown RBP9.34□□□□□ -0.91
LRRC40-201ENST00000370952 SNAI1O95863 264 aaPredicted RBP9.34□□□□□ -0.91
LRRC40-201ENST00000370952 POMCP01189 267 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 EPOP01588 193 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 SDC1P18827 310 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 KIR2DL3P43628 341 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 RPS5P46782 204 aaKnown RBP9.34□□□□□ -0.91
LRRC40-201ENST00000370952 OR1E2P47887 323 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 CRYBA2P53672 197 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 CLDN8P56748 225 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 SCN1BQ07699 218 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 PRRT2Q7Z6L0 340 aaPredicted RBP9.34□□□□□ -0.91
LRRC40-201ENST00000370952 CLDN19Q8N6F1 224 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 OR10G2Q8NGC3 310 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 OR9Q2Q8NGE9 314 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 SLC39A13Q96H72 371 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 APOLD1Q96LR9 279 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 GON7Q9BXV9 100 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 CIPCQ9C0C6 399 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 SLC22A4Q9H015 551 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 MROH8Q9H579 483 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 UBA2Q9UBT2 640 aaPredicted RBP9.34□□□□□ -0.91
LRRC40-201ENST00000370952 PCDHGA2Q9Y5H1 932 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 NLRC5Q86WI3 1866 aa9.34□□□□□ -0.91
LRRC40-201ENST00000370952 NT5C1B-RDH14C9J2C7 533 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 SCAMP3O14828 347 aaKnown RBP9.34□□□□□ -0.92
LRRC40-201ENST00000370952 PRAMEF11O60813 436 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 TSC22D2O75157 780 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 WDR47O94967 919 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 PRLP01236 227 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 CSF3P09919 207 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 CYP2A6P11509 494 aaPredicted RBP9.34□□□□□ -0.92
LRRC40-201ENST00000370952 ODC1P11926 461 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 GABRB1P18505 474 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 LPOP22079 712 aaPredicted RBP9.34□□□□□ -0.92
LRRC40-201ENST00000370952 WEE1P30291 646 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 CDH12P55289 794 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 NKX3-2P78367 333 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 CSTF3Q12996 717 aaKnown RBP9.34□□□□□ -0.92
LRRC40-201ENST00000370952 PPIGQ13427 754 aaKnown RBP eCLIP9.34□□□□□ -0.92
LRRC40-201ENST00000370952 TAF1AQ15573 450 aaPredicted RBP9.34□□□□□ -0.92
LRRC40-201ENST00000370952 TTLL9Q3SXZ7 439 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 ZNF367Q7RTV3 350 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 TRIM46Q7Z4K8 759 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 SERPINA11Q86U17 422 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 RNF130Q86XS8 419 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 VWA5B2Q8N398 1253 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 KLHDC9Q8NEP7 349 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 NLGN4YQ8NFZ3 816 aaPredicted RBP9.34□□□□□ -0.92
LRRC40-201ENST00000370952 ZFAND1Q8TCF1 268 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 SELENOMQ8WWX9 145 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 APIPQ96GX9 242 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 FRMD6Q96NE9 622 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 ACBD6Q9BR61 282 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 BOCQ9BWV1 1114 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 RNF121Q9H920 327 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 ABCB9Q9NP78 766 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 ATP13A2Q9NQ11 1180 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 TMPRSS11EQ9UL52 423 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 TLR6Q9Y2C9 796 aa9.34□□□□□ -0.92
LRRC40-201ENST00000370952 TRAV19A0A0A6YYK7 116 aa9.33□□□□□ -0.92
LRRC40-201ENST00000370952 PLK4O00444 970 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms