RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 FUT10Q6P4F1 479 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 NXPE1Q8N323 547 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 TCEANCQ8N8B7 351 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 KDM1BQ8NB78 822 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 KCNJ9Q92806 393 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 SPACA7Q96KW9 195 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 ZNF717Q9BY31 904 aaPredicted RBP15.46■□□□□ 0.07
COL17A1-202ENST00000369733 SLC6A15Q9H2J7 730 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 KLK1P06870 262 aa15.46■□□□□ 0.06
COL17A1-202ENST00000369733 GK3PQ14409 553 aa15.46■□□□□ 0.06
COL17A1-202ENST00000369733 KANK2Q63ZY3 851 aa15.46■□□□□ 0.06
COL17A1-202ENST00000369733 COMMD4Q9H0A8 199 aa15.46■□□□□ 0.06
COL17A1-202ENST00000369733 ENAMQ9NRM1 1142 aa15.46■□□□□ 0.06
COL17A1-202ENST00000369733 XKRYO14609 159 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 S1PR4O95977 384 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 GBX2P52951 348 aaPredicted RBP15.45■□□□□ 0.06
COL17A1-202ENST00000369733 GRIK2Q13002 908 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 ALG11Q2TAA5 492 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 MBOAT1Q6ZNC8 495 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 THOC6Q86W42 341 aaKnown RBP15.45■□□□□ 0.06
COL17A1-202ENST00000369733 ZFAND4Q86XD8 727 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 MYOCQ99972 504 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 YIPF4Q9BSR8 244 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 GTPBP2Q9BX10 602 aaKnown RBP15.45■□□□□ 0.06
COL17A1-202ENST00000369733 SOHLH2Q9NX45 425 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 HTR3EA5X5Y0 456 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 MTRF1O75570 445 aaKnown RBP15.45■□□□□ 0.06
COL17A1-202ENST00000369733 CTSEP14091 401 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 AMD1P17707 334 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 GGT1P19440 569 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 BMXP51813 675 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 UGT8Q16880 541 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 PTCHD3Q3KNS1 767 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 C4orf46Q504U0 113 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 CEACAM20Q6UY09 585 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 PARGQ86W56 976 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 LSM14AQ8ND56 463 aaKnown RBP15.45■□□□□ 0.06
COL17A1-202ENST00000369733 C1orf216Q8TAB5 229 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 GAB3Q8WWW8 586 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 TFAP2CQ92754 450 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 ARMC5Q96C12 935 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 EFCAB11Q9BUY7 163 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 TSSK6Q9BXA6 273 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 CPNE5Q9HCH3 593 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 NUP188Q5SRE5 1749 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 BCAS1O75363 584 aaPredicted RBP15.45■□□□□ 0.06
COL17A1-202ENST00000369733 KCNE1P15382 129 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 HOXD12P35452 270 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 MAGEA2P43356 314 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 SLC9A3P48764 834 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 DNASE1L1P49184 302 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 GRB14Q14449 540 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 MS4A13Q5J8X5 152 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 LINC00471Q8N535 108 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 HMX1Q9NP08 348 aaPredicted RBP15.45■□□□□ 0.06
COL17A1-202ENST00000369733 TMEM248Q9NWD8 314 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 LRRC37A3O60309 1634 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 FXYD6-FXYD2A0A087WZ82 144 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 C12orf71A8MTZ7 269 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 CKMT1AP12532 417 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 ACVR2AP27037 513 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 ITPKBP27987 946 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 RYKP34925 604 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 WNT7BP56706 349 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 FAM129BQ96TA1 746 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 FUZQ9BT04 418 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 FXYD6Q9H0Q3 95 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 RIMS3Q9UJD0 308 aa15.45■□□□□ 0.06
COL17A1-202ENST00000369733 RGPD8O14715 1765 aaPredicted RBP15.44■□□□□ 0.06
COL17A1-202ENST00000369733 TRAV6A0A075B6T7 132 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 BTBD19C9JJ37 291 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 L7N2F9 121 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 OXSR1O95747 527 aaPredicted RBP15.44■□□□□ 0.06
COL17A1-202ENST00000369733 PTTG1O95997 202 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 CDH11P55287 796 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 CCL23P55773 120 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 EIPR1Q53HC9 387 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 FBXO42Q6P3S6 717 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 NCEH1Q6PIU2 408 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 AMIGO1Q86WK6 493 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 ARL14EPQ8N8R7 260 aaPredicted RBP15.44■□□□□ 0.06
COL17A1-202ENST00000369733 TRIM36Q9NQ86 728 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 MRPS23Q9Y3D9 190 aaKnown RBP15.44■□□□□ 0.06
COL17A1-202ENST00000369733 CPQQ9Y646 472 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 KANTRA0A1W2PQU2 76 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 CH25HO95992 272 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 SH3BP2P78314 561 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 NPRL3Q12980 569 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 PRPF38BQ5VTL8 546 aaKnown RBP15.44■□□□□ 0.06
COL17A1-202ENST00000369733 PNCKQ6P2M8 343 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 SHQ1Q6PI26 577 aaKnown RBP15.44■□□□□ 0.06
COL17A1-202ENST00000369733 NDNFQ8TB73 568 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 MAGIXQ9H6Y5 334 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 HSPE1-MOB4S4R3N1 261 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 A0A0G2JPF8 293 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 ZCWPW2A0A1B0GU75 182 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 CARNS1A5YM72 827 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 FAM170BA6NMN3 283 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 HNRNPCL3B7ZW38 293 aa15.44■□□□□ 0.06
COL17A1-202ENST00000369733 ADH1AP07327 375 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms